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Protein Overview: gi|3834312, gi|1...

General Information:
Name(s) found: gi|3834312 [NCBI NR]
gi|25406573 [NCBI NR]
gi|23297392 [NCBI NR]
gi|18412129 [NCBI NR]
gi|16226591 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|3834312|gb|AAC83028.1| Strong similarity to glycoprotein EP1 gb|L16983 Daucus carota and a member of S locus glycoprotein family PF|00954. ESTs gb|AA067487, gb|Z35737, gb|Z30815, gb|Z35350, gb|AA713171, gb|AI100553, gb|Z34248, gb|AA728536, gb|Z30816 a [NCBI NR]
  • pir||F96817 hypothetical protein F9K20.12 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|23297392|gb|AAN12959.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18412129|ref|NP_565191.1| curculin-like (mannose-binding) lectin family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16226591|gb|AAL16208.1|AF428439_1 At1g78830/F9K20_12 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    apoplast [IDA]
    plant-type cell wall [IDA]
    plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: sugar binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFAILVTL ALAIATVSVV IAQVPPEKQF RVVNEGEFGE YITEYDASYR FIESSNQSFF  60
   61 TSPFQLLFYN TTPSAYILAL RVGLRRDEST MRWIWDANRN NPVGENATLS LGRNGNLVLA 120
  121 EADGRVKWQT NTANKGVTGF QILPNGNIVL HDKNGKFVWQ SFDHPTDTLL TGQSLKVNGV 180
  181 NKLVSRTSDS NGSDGPYSMV LDKKGLTMYV NKTGTPLVYG GWPDHDFRGT VTFAVTREFD 240
  241 NLTEPSAYEL LLEPAPQPAT NPGNNRRLLQ VRPIGSGGGT LNLNKINYNG TISYLRLGSD 300
  301 GSLKAYSYFP AATYLKWEES FSFFSTYFVR QCGLPSFCGD YGYCDRGMCN ACPTPKGLLG 360
  361 WSDKCAPPKT TQFCSGVKGK TVNYYKIVGV EHFTGPYVND GQGPTSVNDC KAKCDRDCKC 420
  421 LGYFYKEKDK KCLLAPLLGT LIKDANTSSV AYIKY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] PSI-BLAST 14.69897 MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS IN COMPLEX WITH MANNOSE-ALPHA1,6-(MANNOSE-ALPHA1,3)-MANNOSE-ALPHA1,6-(MANNOSE-ALPHA1,3)-MANNOSE
    2 View Details [105..329] PSI-BLAST 13.221849 Fetuin-binding protein Scafet precursor
    3 View Details [330..455] MSA 7.209993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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