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Protein Overview: GH39_ARATH

General Information:
Name(s) found: GH39_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana GN=GH3.9 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 585 amino acids

    Gene Ontology:
    Cellular Component: chloroplast envelope [IDA]
    Biological Process: response to auxin stimulus [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVMKLDHDS VLKELERITS KAAEVQDNIL RGILERNKDT EYLSKYMNGS KDVLEFKRAV  60
   61 PIIIYKDIYP YIQRIANGED SSLITGHSIT EILCSSGTSA GEPKLMPTIP EDLDRRTFLY 120
  121 NLIIPIVNKY ITGLDKGKAM YLNFVKAETS TPCGLPIRAV LTSYYKSKHF QCRPYDPFND 180
  181 LTSPIQTILC EDSNQSMYCQ LLAGLIHRHK VMRLGAVFAS AFLRAISYLE KKWSQLCEDI 240
  241 RTGSLNPMIT DPGCQMAMSC LLMSPNPELA SEIEEICGRS SWKGILCQLW PKAKFIEAVV 300
  301 TGSMAQYIPA LEFFSQGKIP LVCPMYASSE TYFGVNVEPL SKPSDVVFTL LPNMCYFEFI 360
  361 PLGKNGTLSF DLDDDEQVPC DKVVDLVNVK LGRYYELVVT TFAGLYRYRI GDVLQVAGFY 420
  421 NGAPQFRFIC RRNVVLSIDL DKTNEEDLHR SITLAKKKLG SNAFLAEYTS YADTSSVPGH 480
  481 YVLFWEIQGH LEPKLMEECC VAVEEELDYI YRQCRTKERS IGALEIRVVK PGTFEKLMDL 540
  541 IISQGGSFNQ YKTPRCVKSN SATFKLLNGH VMASFFSPRD PTWVP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..585] FFAS03 2.6 Phenylalanine activating domain of gramicidin synthetase 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.927181813624701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle