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Protein Overview: gi|25518081, gi|...

General Information:
Name(s) found: gi|25518081 [NCBI NR]
gi|23197842 [NCBI NR]
gi|22136024 [NCBI NR]
gi|15223648 [NCBI NR]
gi|10086494 [NCBI NR]
Description(s) found:
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  • pir||E86330 F6F9.20 protein - Arabidopsis thaliana [NCBI NR]
  • gi|23197842|gb|AAN15448.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22136024|gb|AAM91594.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15223648|ref|NP_173404.1| ATP-dependent protease La (LON) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10086494|gb|AAG12554.1|AC007797_14 Unknown Protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FXH3) F6F9.20 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|22136024|gb|AAM91594.1| unknown protein [Arabidopsis thaliana]gi|25518081|pir||E86330 F6F9.20 protein - Arabidopsis thalianagi|15223648|ref|NP_173404.1| ATP-dependent protease La (LON) domain-containing protein [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ATP-dependent protease La (LON) domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ATP-dependent protease La (LON) domain-containing protein | chr1:6824387-6825223 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP-dependent peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Unknown Protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ATP-dependent protease La (LON) domain protein | chr1:6824396-6825232 FORWARD LENGTH=278 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ATP-dependent protease La domain-containing protein OS=Arabidopsis thaliana GN=F6F9.20 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: NONE FOUND
    Molecular Function: ATP-dependent peptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPSTVSSP SFKSTPPYLS AFNPKPLHLP ATYRSINRRS CKLLSFRCSS SSFSEKHHNN  60
   61 ANPPKSDDLV ELPLFPLPLV LFPGATIPLQ IFEFRYRVMM QTLLQSDLRF GVVYSDAVSG 120
  121 SAAGIGCVGE IVKHERLVDD RFFLICKGQE RFRVTDLVRT KPYLVAKVTW LEDRPSGEEN 180
  181 LDELANEVEV LMKEVIRLSN RLNGKPDKES QDLRKNQFPT PFSFFVGSTF EGAPMEQQAL 240
  241 LELEDTAARL KRERETLRNT LNYLTAASAV KDVFPSQP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] PSI-BLAST 25.69897 Crystal Structure of the Hypothetical Protein BPP1347 from Bordetella parapertussis, Northeast Structural Genomics Target BoR27.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle