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Protein Overview: ROGF1_ARATH

General Information:
Name(s) found: ROGF1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|94730494|sp|Q93ZY2.2|ROGF1_ARATH RecName: Full=Rop guanine nucleotide exchange factor 1; Short=RopGEF1; AltName: Full=Kinase partner protein-like; Short=KPP-like [NCBI NR]
  • pir||T05671 hypothetical protein F22I13.200 - Arabidopsis thaliana [NCBI NR]
  • gi|7270827|emb|CAB80508.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4539351|emb|CAB37499.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|24030442|gb|AAN41375.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23306424|gb|AAN17439.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22137268|gb|AAM91479.1| AT4g38430/F22I13_200 [Arabidopsis thaliana] [NCBI NR]
  • gi|21537213|gb|AAM61554.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|15912195|gb|AAL08231.1| AT4g38430/F22I13_200 [Arabidopsis thaliana] [NCBI NR]
  • gi|15233845|ref|NP_195556.1| ROPGEF1; Rho guanyl-nucleotide exchange factor/ protein binding [Arabidopsis thaliana] [NCBI NR]
  • Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2 [Swiss-Prot]
  • (Q9SVE2) Hypothetical protein (AT4G38430/F22I13_200) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|23306424|gb|AAN17439.1| Unknown protein [Arabidopsis thaliana]gi|21537213|gb|AAM61554.1| unknown [Arabidopsis thaliana]gi|22137268|gb|AAM91479.1| AT4g38430/F22I13_200 [Arabidopsis thaliana]gi|7270827|emb|CAB805 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATROPGEF1, ROPGEF1 | ATROPGEF1/ROPGEF1 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/ protein binding | chr4:17986637-17988653 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT4g38430/F22I13_200 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Rop guanine nucleotide exchange factor 1 (RopGEF1) (Kinase partner protein-like) (KPP-like) [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATROPGEF1, ROPGEF1 | rho guanyl-nucleotide exchange factor 1 | chr4:17986643-17988659 FORWARD LENGTH=548 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 548 amino acids

    Gene Ontology:
    Cellular Component: apical plasma membrane [IDA]
    Biological Process: pollen tube growth [IMP]
    Molecular Function: protein binding [TAS]
    Rho guanyl-nucleotide exchange factor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLSSEEDD EVSSERCGSY SPSADISESE SSSSFSCHRF DGEGASSSIP SSPRVVAGRG  60
   61 FYFPAPVMLP VIGGKDVVWD DKQPDNDLSE IEMMKERFAK LLLGEDMSGG GKGVCTALAI 120
  121 SNAITNLSAT VFGELWRLEP LAPQKKAMWR RELEWLLCVS DSIVELIPSI QQFPGGGTYE 180
  181 IMETRPRSDL YANLPALKKL DAMLIDMLDA FSDTEFWYTD RGIVLGDCDK DSYNSPASVR 240
  241 QEDKWWLPCP KVPPNGLSEE ARKKLQQCRD FANQILKAAL AINSGVLAEM EIPDPYLETL 300
  301 PKSGKECLGE IIYQYLTANK FSPECLLDCL DLSSEHQTLE IANRIEAAVH VWRQKNGRRH 360
  361 KKQAKLKLSS WGGKVKGLVN DNERNDFLVQ RAETLLQSLR IRFPGLPQTT LDMNKIQYNK 420
  421 DVGQSILESY SRVMESMAFN ITARIDDVLY VDDAMRRSIS VTESLSLFSI NGLNPQKAFS 480
  481 VQSSPHGSPF ATPALSVASR SPRRAPPLYS VKRNGTREKG IVGETEKAWS YAGNLSSRRV 540
  541 TGVTPERD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..473] PSI-BLAST 178.0 No description for 2ntxA was found.
    2 View Details [474..548] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle