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Protein Overview: gi|79324249, gi|...

General Information:
Name(s) found: gi|79324249 [NCBI NR]
gi|7446500 [NCBI NR]
gi|3337356 [NCBI NR]
gi|23308213 [NCBI NR]
gi|222423809 [NCBI NR]
gi|21593809 [NCBI NR]
gi|15226261 [NCBI NR]
gi|13605799 [NCBI NR]
Description(s) found:
Found 17 descriptions.
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  • gi|79324249|ref|NP_001031476.1| protein transport protein sec61, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||T02313 endoplasmic reticulum insertion protein F13P17.9 - Arabidopsis thaliana [NCBI NR]
  • gi|3337356|gb|AAC27401.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|23308213|gb|AAN18076.1| At2g34250/F13P17.9 [Arabidopsis thaliana] [NCBI NR]
  • gi|222423809|dbj|BAH19870.1| AT2G34250 [Arabidopsis thaliana] [NCBI NR]
  • gi|21593809|gb|AAM65776.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|15226261|ref|NP_180972.1| protein transport protein sec61, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|13605799|gb|AAK32885.1|AF367298_1 At2g34250/F13P17.9 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 475 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: protein secretion [ISS]
    Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGFRVLHL VRPFLAFLPE VQSADRKVPF REKVIYTVIS LFIFLVCSQL PLYGIHSTTG  60
   61 ADPFYWMRVI LASNRGTVME LGITPIVTSG LVMQLLAGSK IIEVDNNVRE DRALLNGAQK 120
  121 LLGILIAIGE AVAYVLSGMY GPVGQLGVGN AILIILQLFF AGIIVICLDE LLQKGYGLGS 180
  181 GISLFIATNI CESIIWKAFS PTTINTGRGA EFEGAVIALF HMLITKSNKV AALRQAFYRQ 240
  241 NLPNVTNLLA TVLIFLIVIY FQGFRVVLPV RSKNARGQQG SYPIKLFYTS NMPIILQSAL 300
  301 VSNLYFISQL LYRKFSGNFF VNLLGQWKES EYSGQSIPVS GLAYLITAPA SFSDMAAHPF 360
  361 HALFYIVFML TACALFSKTW IEVSGSSARD VAKQLKEQQM VMPGHRESNL QKELNRYIPT 420
  421 AAAFGGVCIG ALTVLADFMG AIGSGTGILL AVTIIYQYFE TFEKEKASEL GFFGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..475] PSI-BLAST 65.09691 The structure of a protein conducting channel

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribonucleoprotein binding
    		•  5.96221631042313 bayes_pls_golite062009
  • protein transporter activity
    		•  5.55929343005534 bayes_pls_golite062009
  • transporter activity
    		•  3.32223562584466 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.22714325269757 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven protein transmembrane transporter activity
    		•  2.12732472524264 bayes_pls_golite062009
  • macromolecule transmembrane transporter activity
    		•  2.12732472524264 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  1.76187269823414 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.67782980643723 bayes_pls_golite062009
  • binding
    		•  1.4562802789412 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.42890247609405 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  1.15847548838424 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  1.15316743403707 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.10003802565492 bayes_pls_golite062009
  • peptide transporter activity
    		•  1.01893828721893 bayes_pls_golite062009
  • protein binding
    		•  0.674651002700028 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle