| Protein: | gi|79324249, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 475 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79324249, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
504.0 | [0..4] | [474..1012] |
|
Region A: Residues: [1-475] |
1 11 21 31 41 51
| | | | | |
1 MGGGFRVLHL VRPFLAFLPE VQSADRKVPF REKVIYTVIS LFIFLVCSQL PLYGIHSTTG 60
61 ADPFYWMRVI LASNRGTVME LGITPIVTSG LVMQLLAGSK IIEVDNNVRE DRALLNGAQK 120
121 LLGILIAIGE AVAYVLSGMY GPVGQLGVGN AILIILQLFF AGIIVICLDE LLQKGYGLGS 180
181 GISLFIATNI CESIIWKAFS PTTINTGRGA EFEGAVIALF HMLITKSNKV AALRQAFYRQ 240
241 NLPNVTNLLA TVLIFLIVIY FQGFRVVLPV RSKNARGQQG SYPIKLFYTS NMPIILQSAL 300
301 VSNLYFISQL LYRKFSGNFF VNLLGQWKES EYSGQSIPVS GLAYLITAPA SFSDMAAHPF 360
361 HALFYIVFML TACALFSKTW IEVSGSSARD VAKQLKEQQM VMPGHRESNL QKELNRYIPT 420
421 AAAFGGVCIG ALTVLADFMG AIGSGTGILL AVTIIYQYFE TFEKEKASEL GFFGF
|
| Detection Method: |  |
| Confidence: | 65.09691 |
| Match: | 1rh5A |
| Description: | The structure of a protein conducting channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonucleoprotein binding | 5.96221631042313 | bayes_pls_golite062009 |
| protein transporter activity | 5.55929343005534 | bayes_pls_golite062009 |
| transporter activity | 3.32223562584466 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.22714325269757 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.12732472524264 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 2.12732472524264 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 1.76187269823414 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.67782980643723 | bayes_pls_golite062009 |
| binding | 1.4562802789412 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.42890247609405 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 1.15847548838424 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 1.15316743403707 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.10003802565492 | bayes_pls_golite062009 |
| peptide transporter activity | 1.01893828721893 | bayes_pls_golite062009 |
| protein binding | 0.674651002700028 | bayes_pls_golite062009 |
