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Protein Overview: gi|23506045, gi|...

General Information:
Name(s) found: gi|25412332 [NCBI NR]
gi|23506045 [NCBI NR]
gi|20465659 [NCBI NR]
gi|20197751 [NCBI NR]
gi|18175673 [NCBI NR]
gi|15224749 [NCBI NR]
gi|14194101 [NCBI NR]
Description(s) found:
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  • pir||H84649 probable DnaJ protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|23506045|gb|AAN28882.1| At2g25560/F13B15.22 [Arabidopsis thaliana] [NCBI NR]
  • gi|20465659|gb|AAM20298.1| putative DnaJ protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20197751|gb|AAM15231.1| putative DnaJ protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18175673|gb|AAL59908.1| putative DnaJ protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15224749|ref|NP_180126.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14194101|gb|AAK56245.1|AF367256_1 At2g25560/F13B15.22 [Arabidopsis thaliana] [NCBI NR]
  • (Q9SLA7) Putative DnaJ protein (At2g25560/F13B15.22) [athaliana3702.FASTAC.txt]
  • At2g25560/F13B15.22 [Arabidopsis thaliana]gi|20465659|gb|AAM20298.1| putative DnaJ protein [Arabidopsis thaliana]gi|18175673|gb|AAL59908.1| putative DnaJ protein [Arabidopsis thaliana]gi|20197751|gb|AAM15231.1| putative DnaJ protein [Arabidopsis thalia [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:10888868-10890838 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative DnaJ protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g25560/F13B15.22 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:10881790-10883760 FORWARD LENGTH=656 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g25560/F13B15.22 OS=Arabidopsis thaliana GN=At2g25560 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 656 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFNKEEATR AREIAKRKFL ANDFAGARKF ALKAQFLYPE LDGIAQMVAT FDVHLSAQNI  60
   61 IYGDVDHYGV LGLNPEADDE IVRKRYRKLA VMLHPDRNKS VGAEEAFKFL SQAWGVFSDK 120
  121 AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA 180
  181 TTSTSAQKTT ADGTFWTVCR TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR 240
  241 KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE 300
  301 VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK 360
  361 AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV NKNAIESCCM NTDKELNSLG 420
  421 ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW 480
  481 LTPVTNGEPS STNWLGFGIP KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT 540
  541 GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD 600
  601 SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] MSA 2.186993 View MSA. Confident ab initio structure predictions are available.
    2 View Details [65..149] PSI-BLAST 19.0 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [150..457] PSI-BLAST 19.39794 The crystal structure of Hsp40 Ydj1
    4 View Details [458..656] MSA 2.091953 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle