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Protein Overview: CDC23_ARATH

General Information:
Name(s) found: CDC23_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Anaphase-promoting complex subunit 8 OS=Arabidopsis thaliana GN=APC8 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 579 amino acids

    Gene Ontology:
    Cellular Component: anaphase-promoting complex [IEA]
    Biological Process: regulation of mitotic metaphase/anaphase transition [IEA]
    cell cycle [ISS]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSKECCRNE IRAAIRQLSD RCLYSAAKWA GEQLVGIEQD PSNFTPANTR FQRGSSSIRR  60
   61 RFSTNESIST PLPSVGFSQA ATPLPEEDEA IDGDIYLLAK SYFDCREYRR ASHMLRDQVS 120
  121 KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG 180
  181 LYLYGVVLKE KGNESLARAS LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE 240
  241 FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN 300
  301 DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM 360
  361 YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV DINPTDYRAW YGLGQAYEMM 420
  421 GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL 480
  481 NQLAKLHQKL GRNEEAAYYF EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY 540
  541 CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] Pfam 48.552842 No description for PF04049.4 was found. Confident ab initio structure predictions are available.
    2 View Details [106..174] PSI-BLAST 22.221849 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
    3 View Details [175..579] PSI-BLAST 55.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle