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Protein Overview: RH27_ARATH

General Information:
Name(s) found: RH27_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana GN=RH27 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 633 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLDMEQHS SENEEIKKKK HKKRARDEAK KLKQPAMEEE PDHEDGDAKE NNALIDEEPK  60
   61 KKKKKKNKKR GDTDDGEDEA VAEEEPKKKK KKNKKLQQRG DTNDEEDEVI AEEEEPKKKK 120
  121 KKQRKDTEAK SEEEEVEDKE EEKKLEETSI MTNKTFESLS LSDNTYKSIK EMGFARMTQI 180
  181 QAKAIPPLMM GEDVLGAART GSGKTLAFLI PAVELLYRVK FTPRNGTGVL VICPTRELAI 240
  241 QSYGVAKELL KYHSQTVGKV IGGEKRKTEA EILAKGVNLL VATPGRLLDH LENTNGFIFK 300
  301 NLKFLVMDEA DRILEQNFEE DLKKILNLLP KTRQTSLFSA TQSAKVEDLA RVSLTSPVYI 360
  361 DVDEGRKEVT NEGLEQGYCV VPSAMRLLFL LTFLKRFQGK KKIMVFFSTC KSTKFHAELF 420
  421 RYIKFDCLEI RGGIDQNKRT PTFLQFIKAE TGILLCTNVA ARGLDFPHVD WIVQYDPPDN 480
  481 PTDYIHRVGR TARGEGAKGK ALLVLTPQEL KFIQYLKAAK IPVEEHEFEE KKLLDVKPFV 540
  541 ENLISENYAL KESAKEAYKT YISGYDSHSM KDVFNVHQLN LTEVATSFGF SDPPKVALKI 600
  601 DRGGYRSKRE PVNKFKRGRG GGRPGGKSKF ERY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] deduced N/A No confident structure predictions are available.
    2 View Details [101..527] PSI-BLAST 82.045757 No description for 2db3A was found.
    3 View Details [528..633] PSI-BLAST 26.0 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle