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Protein Overview: gi|18399910, gi|...

General Information:
Name(s) found: gi|25090441 [NCBI NR]
gi|21928166 [NCBI NR]
gi|20198153 [NCBI NR]
gi|18399910 [NCBI NR]
Description(s) found:
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  • gi|25090441|gb|AAN72302.1| At2g22230/T26C19.11 [Arabidopsis thaliana] [NCBI NR]
  • gi|21928166|gb|AAM78110.1| At2g22230/T26C19.11 [Arabidopsis thaliana] [NCBI NR]
  • gi|20198153|gb|AAD23619.2| putative beta-hydroxyacyl-ACP dehydratase [Arabidopsis thaliana] [NCBI NR]
  • gi|18399910|ref|NP_565528.1| beta-hydroxyacyl-ACP dehydratase, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9SIE3) Putative beta-hydroxyacyl-ACP dehydratase (At2g22230/T26C19.11) [athaliana3702.FASTAC.txt]
  • At2g22230/T26C19.11 [Arabidopsis thaliana]gi|20198153|gb|AAD23619.2| putative beta-hydroxyacyl-ACP dehydratase [Arabidopsis thaliana]gi|25090441|gb|AAN72302.1| At2g22230/T26C19.11 [Arabidopsis thaliana]gi|18399910|ref|NP_565528.1| beta-hydroxyacyl-ACP [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Beta-hydroxyacyl-ACP dehydratase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | beta-hydroxyacyl-ACP dehydratase, putative | chr2:9457122-9458507 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g22230/T26C19.11 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 3-hydroxyacyl-[acyl-carrier protein] dehydratase/ catalytic [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative beta-hydroxyacyl-ACP dehydratase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Thioesterase superfamily protein | chr2:9450042-9451427 FORWARD LENGTH=220 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 3R-hydroxymyristoyl ACP dehydrase OS=Arabidopsis thaliana GN=At2g22230 PE=2 SV=2 [ARATH-contam.fasta]
  • At2g22230/T26C19.11 OS=Arabidopsis thaliana GN=At2g22230 PE=2 SV=2 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 220 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cell wall [IDA]
    Biological Process: defense response to fungus, incompatible interaction [IDA]
    fatty acid biosynthetic process [ISS]
    Molecular Function: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity [IDA][ISS]
    3-hydroxybutyryl-[acyl-carrier-protein] dehydratase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTSNSVLF LSSDSLIHHH HHQPLHLSSS RSHSVSLPPN KRSNSLTLRC STNGDSTSTE  60
   61 KETPIELKFP AFPTVMDINQ IREILPHRFP FLLVDRVIEY TPGVSAVAIK NVTINDNFFP 120
  121 GHFPERPIMP GVLMIEAMAQ VGGIVMLQPE VGGSQDNFFF AGIDKVRFRK PVIAGDTLVM 180
  181 RMTLLKFQKR FGLAKMEGKA YVGGALVCEG EFMMVSAGSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] PSI-BLAST 46.69897 The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • CoA hydrolase activity
    		•  1.75530090056705 bayes_pls_golite062009
  • catalytic activity
    		•  1.11649534052993 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.65794221902015 bayes_pls_golite062009
  • 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
    		•  0.57527342054578 bayes_pls_golite062009
  • 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
    		•  0.57527342054578 bayes_pls_golite062009
  • acyl-CoA thioesterase activity
    		•  0.24094527143225 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle