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Protein Overview: gi|8777354, gi|2...

General Information:
Name(s) found: gi|8777354 [NCBI NR]
gi|23308465 [NCBI NR]
gi|22135838 [NCBI NR]
gi|15242065 [NCBI NR]
Description(s) found:
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  • gi|8777354|dbj|BAA96944.1| microtubule-associated protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|23308465|gb|AAN18202.1| At5g57210/MJB24_2 [Arabidopsis thaliana] [NCBI NR]
  • gi|22135838|gb|AAM91105.1| AT5g57210/MJB24_2 [Arabidopsis thaliana] [NCBI NR]
  • gi|15242065|ref|NP_200531.1| microtubule-associated protein-related [Arabidopsis thaliana] [NCBI NR]
  • (Q9LVD7) Microtubule-associated protein-like (AT5g57210/MJB24_2) [athaliana3702.FASTAC.txt]
  • At5g57210/MJB24_2 [Arabidopsis thaliana]gi|8777354|dbj|BAA96944.1| microtubule-associated protein-like [Arabidopsis thaliana]gi|22135838|gb|AAM91105.1| AT5g57210/MJB24_2 [Arabidopsis thaliana]gi|15242065|ref|NP_200531.1| microtubule-associated protein- [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Microtubule-associated protein-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | microtubule-associated protein-related | chr5:23198314-23200931 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • microtubule-associated protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g57210/MJB24_2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g57210/MJB24_2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:23181088-23183705 REVERSE LENGTH=737 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g57210/MJB24_2 OS=Arabidopsis thaliana GN=At5g57210 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 737 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    intracellular [IEA]
    Biological Process: regulation of Rab GTPase activity [IEA]
    Molecular Function: Rab GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIHEETQIS TTQDPPCTSN DASPPQDHRF EKLRGVRWRI NLGILPSSPS STIDELRRVT  60
   61 ADSRRRYAAL RRRLLIDPHL PKKGTNSPDL TIDNPLSQNP DSTWGRFFRN AELEKTLDQD 120
  121 LSRLYPEHGS YFQSSGCQGM LRRILLLWCL KHPEIGYRQG MHELLAPLLY VLQVDVQYLT 180
  181 EVRSNYEDQF VDLFDELAFQ ERDSGAYDFD IKKVLDDSME DEEEDGPPSG STKKKKPKSF 240
  241 DELDTETQTA VLLSDAYGGE GELGIVLSDK FMEHDAYTMF DALMYGGSSL GSVSVANFFI 300
  301 YSAPNDSITG LPPVIEASGA LYHLLSLVDA SLHSHLVELG VEPQYFALRW LRVLFGREFP 360
  361 LSNLLIVWDE IFSADNSEVE RGVEADLGCE FRILSSPRGA LVAGMAVSMI LYLRSSLLAT 420
  421 ENATSSLKKL LNFPEDIDLS KVIEKAKTLQ SLALEINARR DLIPKGPRKP MRGHSLSVDS 480
  481 ISLGSSPVGI EPESYWEEKW RVLNSAEEEE RRKKALQRPK AGKKSWSERV KLRLSRTESD 540
  541 PSPAEAKRSG NKPHIRRSLL DDLSRQLGEK EIEPPEFPNP DTDIERSSTV SDTPSAEYED 600
  601 NSSDKGKSEN HMDLPLSIPE NEPEAKSGMN IFRERKILSG KFQRLWRLGR NLSGEETSET 660
  661 KEAKQVDSED GKTDSDSTSG PGDSLKNTGR SMLEHIKVIE SVLELSSPEN MTENGKLTVE 720
  721 EALRELRRLG NMLLSEM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] FFAS03 1.4 No description for 2g77A was found.
    2 View Details [107..465] PSI-BLAST 30.39794 No description for 2qfzA was found.
    3 View Details [466..737] MSA 3.243996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle