Protein Overview: RBOHD_ARATH

General Information:
Name(s) found:	RBOHD_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|75170840\|sp\|Q9FIJ0.1\|RBOHD_ARATH RecName: Full=Respiratory burst oxidase homolog protein D; AltName: Full=NADPH oxidase RBOHD; Short=AtRBOHD [NCBI NR] gi\|27363296\|gb\|AAO11567.1\| At5g47910/MCA23_25 [Arabidopsis thaliana] [NCBI NR] gi\|15983501\|gb\|AAL11618.1\|AF424625_1 AT5g47910/MCA23_25 [Arabidopsis thaliana] [NCBI NR] gi\|15238842\|ref\|NP_199602.1\| RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D); NAD(P)H oxidase [Arabidopsis thaliana] [NCBI NR] gi\|10177927\|dbj\|BAB11338.1\| respiratory burst oxidase protein [Arabidopsis thaliana] [NCBI NR] Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1 [Swiss-Prot] (Q9FIJ0) Respiratory burst oxidase protein (AT5g47910/MCA23_25) [athaliana3702.FASTAC.txt] respiratory burst oxidase protein [Arabidopsis thaliana]gi\|27363296\|gb\|AAO11567.1\| At5g47910/MCA23_25 [Arabidopsis thaliana]gi\|15983501\|gb\|AAL11618.1\| AT5g47910/MCA23_25 [Arabidopsis thaliana]gi\|15238842\|ref\|NP_199602.1\| respiratory burst oxidase prote [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Respiratory burst oxidase protein D (RbohD) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: ATRBOHD, RBOHD \| RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) \| chr5:19414811-19418994 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] respiratory burst oxidase protein [Arabidopsis thaliana] [nr-271106-contam.fasta] AT5g47910/MCA23_25 [Arabidopsis thaliana] [nr-271106-contam.fasta] RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) [Arabidopsis thaliana] [nr-271106-contam.fasta] At5g47910/MCA23_25 [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: RBOHD, ATRBOHD \| respiratory burst oxidase homologue D \| chr5:19397585-19401768 FORWARD LENGTH=921 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	921 amino acids
Gene Ontology:
Cellular Component:	plasma membrane [IDA]
Biological Process:	oxygen and reactive oxygen species metabolic process [IMP][TAS] response to heat [IMP] negative regulation of programmed cell death [IGI] defense response [IMP] defense response to fungus [IMP]
Molecular Function:	NAD(P)H oxidase activity [IMP][TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP  60
   61 KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG GHLEDPELAL LTKKTLESSL 120
  121 NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA 180
  181 AWPAVDQRFD KLSADSNGLL LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE 240
  241 QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE 300
  301 YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV 360
  361 RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN KAAYGVMGYC VCVAKGGAET 420
  421 LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC 480
  481 DFPRLIAADE DTYEPMEKYF GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN 540
  541 KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY 600
  601 ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH 660
  661 PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA GKSGLLRADG GDGNLPFPKV 720
  721 LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS 780
  781 KGFKTRKAYF YWVTREQGSF EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA 840
  841 MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK 900
  901 NLALDFSRKT TTKFDFHKEN F

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

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Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
oxidoreductase activity	3.63104057348215	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH	3.51215695612257	bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity	3.16088106136981	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor	3.111558299994	bayes_pls_golite062009
oxygen binding	3.00647431286466	bayes_pls_golite062009
riboflavin synthase activity	2.93302227890511	bayes_pls_golite062009
transporter activity	2.82854186201092	bayes_pls_golite062009
substrate-specific transporter activity	2.74894673967321	bayes_pls_golite062009
NADH dehydrogenase activity	2.39225626523677	bayes_pls_golite062009
NADH dehydrogenase (quinone) activity	2.34041929019601	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor	2.2317814267351	bayes_pls_golite062009
FAD binding	2.07600122867642	bayes_pls_golite062009
oxygen transporter activity	1.78021144232114	bayes_pls_golite062009
coenzyme binding	1.66552102285114	bayes_pls_golite062009
molecular transducer activity	1.59457655213395	bayes_pls_golite062009
signal transducer activity	1.59457655213395	bayes_pls_golite062009
cytochrome-b5 reductase activity	1.5685421124725	bayes_pls_golite062009
cofactor binding	1.53717310937468	bayes_pls_golite062009
catalytic activity	1.45374095556065	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor	1.39469367242077	bayes_pls_golite062009
binding	1.33256635332573	bayes_pls_golite062009
protein binding	1.29518074303313	bayes_pls_golite062009
NADP or NADPH binding	1.18833847639357	bayes_pls_golite062009
receptor activity	0.977817619616883	bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors	0.90349352746963	bayes_pls_golite062009
FMN binding	0.649158247260553	bayes_pls_golite062009
antioxidant activity	0.46048982927229	bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor	0.431171115433616	bayes_pls_golite062009
peroxidase activity	0.431171115433616	bayes_pls_golite062009
NAD(P)H oxidase activity	0.270721094503631	bayes_pls_golite062009
transferase activity	0.00498326987177106	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..158]	PSI-BLAST	5.0	No description for 2cn5A was found.
2	View Details	[159..340]	PSI-BLAST	42.69897	Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode
3	View Details	[341..489]	deduced	N/A	No confident structure predictions are available.
4	View Details	[490..921]	PSI-BLAST	50.69897	Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain

Protein Overview: RBOHD_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: