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Protein Overview: OPT6_ARATH

General Information:
Name(s) found: OPT6_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T05878 isp4 protein homolog T29A15.220 - Arabidopsis thaliana [NCBI NR]
  • gi|7269627|emb|CAB81423.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|67460978|sp|Q9T095.1|OPT6_ARATH RecName: Full=Oligopeptide transporter 6; Short=AtOPT6 [NCBI NR]
  • gi|4469024|emb|CAB38285.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23296484|gb|AAN13068.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234254|ref|NP_194503.1| OPT6 (OLIGOPEPTIDE TRANSPORTER 1); oligopeptide transporter [Arabidopsis thaliana] [NCBI NR]
  • Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 [Swiss-Prot]
  • (Q9T095) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|7269627|emb|CAB81423.1| putative protein [Arabidopsis thaliana]gi|4469024|emb|CAB38285.1| putative protein [Arabidopsis thaliana]gi|7487931|pir||T05878 isp4 protein homolog T29A15.220 - Arabidopsis thalianagi|1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oligopeptide transporter 6 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATOPT6 | ATOPT6 (oligopeptide transporter 6); oligopeptide transporter | chr4:13834030-13836474 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Oligopeptide transporter 6 (AtOPT6) [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATOPT6; oligopeptide transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATOPT6, OPT6 | oligopeptide transporter 1 | chr4:13834024-13836468 REVERSE LENGTH=736 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 736 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plasma membrane [IDA]
    Biological Process: oligopeptide transport [IGI]
    Molecular Function: oligopeptide transporter activity [IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEIATEFTP VMDDDDDRCV VPEVELTVPK TDDSTLPVLT FRMWVLGIGA CIVLSFINQF  60
   61 FWYRTMPLSI TGISAQIAVV PLGHLMARVL PTKRFLEGTR FQFTLNPGAF NVKEHVLITI 120
  121 FANSGAGSVY ATHILSAIKL YYKRSLPFLP AFLVMITTQI LGFGWAGLFR KHLVEPGEMW 180
  181 WPSNLVQVSL FGALHEKEKK SRGGMSRTQF FLIVLVASFA YYIFPGYLFT MLTSISWVCW 240
  241 LNPKSILVNQ LGSGEHGLGI GSIGFDWVTI SAYLGSPLAS PLFASVNVAI GFVLVMYIVT 300
  301 PVCYWLNIYD AKTFPIFSSQ LFMGNGSRYD VLSIIDSKFH LDRVVYSRTG SINMSTFFAV 360
  361 TYGLGFATLS ATIVHVLVFN GSDLWKQTRG AFQKNKKMDI HTRIMKKNYR EVPLWWFLVI 420
  421 LLLNIALIMF ISVHYNATVQ LPWWGVLLAC AIAISFTPLI GVIAATTNQA PGLNIITEYV 480
  481 IGYIYPERPV ANMCFKVYGY ISMTQALTFI SDFKLGHYMK IPPRSMFMAQ VAGTLVAVVV 540
  541 YTGTAWWLME EIPHLCDTSL LPSDSQWTCP MDRVFFDASV IWGLVGPRRV FGDLGEYSNV 600
  601 NWFFLVGAIA PLLVWLATKM FPAQTWIAKI HIPVLVGATA MMPPATAVNF TSWLIVAFIF 660
  661 GHFIFKYRRV WWTKYNYVLS GGLDAGSAFM TILLFLALGR KGIEVQWWGN SGDRDTCPLA 720
  721 SCPTAKGVVV KGCPVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..261] MSA 2.183979 View MSA. No confident structure predictions are available.
    2 View Details [262..536] deduced N/A No confident structure predictions are available.
    3 View Details [537..736] MSA 3.199991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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