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Protein Overview: DJ1D_ARATH

General Information:
Name(s) found: DJ1D_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6728990|gb|AAF26988.1|AC018363_33 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|24030368|gb|AAN41347.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232958|ref|NP_186921.1| DJ-1 family protein / protease-related [Arabidopsis thaliana] [NCBI NR]
  • Protein DJ-1 homolog D OS=Arabidopsis thaliana GN=DJ1D PE=1 SV=1 [Swiss-Prot]
  • (Q9M8R4) F13E7.34 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|24030368|gb|AAN41347.1| unknown protein [Arabidopsis thaliana]gi|15232958|ref|NP_186921.1| DJ-1 family protein / protease-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DJ-1 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DJ-1 family protein / protease-related | chr3:586343-588095 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr3:586336-588088 FORWARD LENGTH=388 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 388 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: hydrolase activity, acting on glycosyl bonds [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSRTVLIL CGDYMEDYEV MVPFQALQAF GITVHTVCPG KKAGDSCPTA VHDFCGHQTY  60
   61 FESRGHNFTL NATFDEVDLS KYDGLVIPGG RAPEYLALTA SVVELVKEFS RSGKPIASIC 120
  121 HGQLILAAAD TVNGRKCTAY ATVGPSLVAA GAKWVEPITP DVCVVDGSLI TAATYEGHPE 180
  181 FIQLFVKALG GKITGANKRI LFLCGDYMED YEVKVPFQSL QALGCQVDAV CPEKKAGDRC 240
  241 PTAIHDFEGD QTYSEKPGHT FALTTNFDDL VSSSYDALVI PGGRAPEYLA LNEHVLNIVK 300
  301 EFMNSEKPVA SICHGQQILA AAGVLKGRKC TAYPAVKLNV VLGGGTWLEP DPIDRCFTDG 360
  361 NLVTGAAWPG HPEFVSQLMA LLGIQVSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] PSI-BLAST 40.0 Intracellular protease
    2 View Details [194..388] FFAS03 6.53 Intracellular protease

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • peptidase activity
    		•  0.979854267460874 bayes_pls_golite062009
  • ligase activity
    		•  0.446163365364068 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.399144189094009 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.21522719658673 bayes_pls_golite062009
  • peptidase activity
    		•  0.896575265937114 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.346373316079299 bayes_pls_golite062009
  • ligase activity
    		•  0.176408333905896 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle