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Protein Overview: gi|24899709, gi|...

General Information:
Name(s) found: gi|7267269 [NCBI NR]
gi|25294086 [NCBI NR]
gi|24899709 [NCBI NR]
gi|15234593 [NCBI NR]
gi|14423390 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|7267269|emb|CAB81052.1| MYB-like protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B85064 MYB-like protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|24899709|gb|AAN65069.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234593|ref|NP_192419.1| AtMYB74 (myb domain protein 74); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|14423390|gb|AAK62377.1|AF386932_1 Unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 324 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    regulation of transcription, DNA-dependent [ISS]
    response to jasmonic acid stimulus [IEP]
    response to ethylene stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPCCEKK NGLKKGPWTP EEDQKLIDYI NIHGYGNWRT LPKNAGLQRC GKSCRLRWTN  60
   61 YLRPDIKRGR FSFEEEETII QLHSIMGNKW SAIAARLPGR TDNEIKNYWN THIRKRLLKM 120
  121 GIDPVTHTPR LDLLDISSIL SSSIYNSSHH HHHHHQQHMN MSRLMMSDGN HQPLVNPEIL 180
  181 KLATSLFSNQ NHPNNTHENN TVNQTEVNQY QTGYNMPGNE ELQSWFPIMD QFTNFQDLMP 240
  241 MKTTVQNSLS YDDDCSKSNF VLEPYYSDFA SVLTTPSSSP TPLNSSSSTY INSSTCSTED 300
  301 EKESYYSDNI TNYSFDVNGF LQFQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] PSI-BLAST 37.0 CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES
    2 View Details [175..324] MSA 3.535995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle