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Protein Overview: PUM24_ARATH

General Information:
Name(s) found: PUM24_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Pumilio homolog 24 OS=Arabidopsis thaliana GN=APUM24 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 641 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDA]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA][ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKGLKPQK STKRKDTDSS AKFDSLKSKK PKLVSGEQQQ HVKPKFGKPK SAGDKEQSTN  60
   61 LSKKERRVQA KELTEARKKK RKPHYNLEQE LVSLWEKMRR RNIGKEDRSK LISEAIRKMK 120
  121 GKVPEIAVSH VSSRVLQTCV KFCSQAEKDV LFTELQPQFL NLASNKYAVH FIQKMLDGAS 180
  181 KQQLAACISS LRGHVAPLLR HVFGSLVVEH AYHLGSAAQK QELLAELYST ELQLFKGLTT 240
  241 SNEKTVVDII AKLGLQKGAV NRHMTAIIQP ILEKGIVDHT ITHKLLIEYL TIADKTSAAD 300
  301 VLQLLTGSLL LRMVHTRDGS RLAMLSIKHG SAKERKKIIK AMKEHVKKMA FDQFGSMVLA 360
  361 CIFSIVDDTK LVTKIIVREL EATLKDLVMD KNGRRPLLQL LHPNSSRYLS HDDLAALDLS 420
  421 VPSLCSMDKS ETSSKTKDTD GNEIGEETKD EQEDTVAEHS DHEENVTAMG GKKDPLVRRQ 480
  481 ELLVNSGLAE RLIDVCVENA EEFLQSKFGN EVMYEVAIGG SDGILCPSLS EKLCELYEAI 540
  541 SSVAAEPKPQ ESEKDSEHIL ENFHSSRTIR RLVLNRPGFA SILFKKALSG KCRSWAQGHC 600
  601 SKILSAFVET EDVQVREMAK TELQVLVNEG TLKISATKKP E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..442] PSI-BLAST 90.522879 Pumilio 1
    3 View Details [443..641] FFAS03 1.05 Pumilio 1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle