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Protein Overview: gi|20260038, gi|...

General Information:
Name(s) found: gi|3834328 [NCBI NR]
gi|25406572 [NCBI NR]
gi|20260038 [NCBI NR]
gi|17065264 [NCBI NR]
gi|15810615 [NCBI NR]
gi|15219197 [NCBI NR]
gi|14334886 [NCBI NR]
Description(s) found:
Found 18 descriptions.
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  • gi|3834328|gb|AAC83044.1| Strong similarity to glycoprotein EP1 gb|L16983 Daucus carota and a member of S locus glycoprotein family PF|00954. [Arabidopsis thaliana] [NCBI NR]
  • pir||E96817 hypothetical protein F9K20.13 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20260038|gb|AAM13366.1| strong similarity to glycoprotein EP1 [Arabidopsis thaliana] [NCBI NR]
  • gi|17065264|gb|AAL32786.1| Strong similarity to glycoprotein EP1 [comment= [Arabidopsis thaliana] [NCBI NR]
  • gi|15810615|gb|AAL07195.1| putative glycoprotein EP1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15219197|ref|NP_178003.1| curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14334886|gb|AAK59621.1| putative glycoprotein EP1 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IDA]
    Biological Process: NONE FOUND
    Molecular Function: sugar binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFDYLLIT ALAISTVSVV MAQVPPEKQF RVLNEPGYAP YITEYDASYR FLNSPNQNFF  60
   61 TIPFQLMFYN TTPSAYVLAL RVGTRRDMSF TRWIWDANRN NPVGDNSTLS FGRNGNLVLA 120
  121 ELNGQVKWQT NTANKGVTGF QILPNGNMVL HDKHGKFVWQ SFDHPTDTLL VGQSLKVNGV 180
  181 NKLVSRTSDM NGSDGPYSMV LDNKGLTMYV NKTGTPLVYG GWTDHDFRGT VTFAVTREFD 240
  241 NLTEPSAYEL LLEPAPQPAT NPGNNRRLLQ VRPIGSGGGT LNLNKINYNG TISYLRLGSD 300
  301 GSLKAFSYFP AATYLEWEET FAFFSNYFVR QCGLPTFCGD YGYCDRGMCV GCPTPKGLLA 360
  361 WSDKCAPPKT TQFCSGGKGK AVNYYKIVGV EHFTGPYVND GQGPTSVNDC KAKCDRDCKC 420
  421 LGYFYKEKDK KCLLAPLLGT LIKDANTSSV AYIKY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 14.09691 MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS IN COMPLEX WITH MANNOSE-ALPHA1,6-(MANNOSE-ALPHA1,3)-MANNOSE-ALPHA1,6-(MANNOSE-ALPHA1,3)-MANNOSE
    2 View Details [113..329] PSI-BLAST 13.39794 Fetuin-binding protein Scafet precursor
    3 View Details [330..455] FFAS03 0.99 Xanthine dehydrogenase chain A, domain 2; Xanthine dehydrogenase chain A, N-terminal domain; Xanthine dehydrogenase chain A, domain 4; Xanthine dehydrogenase chain A, domain 3

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • carbohydrate binding
    		•  1.06384882147532 bayes_pls_golite062009
  • binding
    		•  0.911808444515266 bayes_pls_golite062009
  • protein binding
    		•  0.297172869337445 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.530245158833685 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle