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Protein Overview: gi|15237726, gi|...

General Information:
Name(s) found: gi|8843787 [NCBI NR]
gi|15237726 [NCBI NR]
Description(s) found:
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  • gi|8843787|dbj|BAA97335.1| gibberellin oxidase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237726|ref|NP_200674.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LUZ1) Gibberellin oxidase-like protein [athaliana3702.FASTAC.txt]
  • gibberellin oxidase-like protein [Arabidopsis thaliana]gi|15237726|ref|NP_200674.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oxidoreductase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr5:23718735-23721028 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • gibberellin oxidase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • iron ion binding / isopenicillin-N synthase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:23701509-23703802 FORWARD LENGTH=352 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Gibberellin oxidase-like protein OS=Arabidopsis thaliana GN=At5g58660 PE=3 SV=1 [ARATH-contam.fasta]
  • Gibberellin oxidase-like protein OS=Arabidopsis thaliana GN=At5g58660 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: oxidoreductase activity [IEA]
    iron ion binding [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE  60
   61 NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY FWGTPALNRS GDALKRGAQA 120
  121 SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF 180
  181 EAIAQTLNLE LSGNRRSEYL SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE 240
  241 DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC 300
  301 YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] PSI-BLAST 76.0 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 1-aminocyclopropane-1-carboxylate oxidase activity
    		•  2.55319769490634 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  1.82471557626796 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
    		•  1.45256699472411 bayes_pls_golite062009
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • binding
    		•  0.881222146308311 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.748070809709687 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle