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View Structure Prediction Details

Protein: gi|15237726, gi|...
Organism: Arabidopsis thaliana
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237726, gi|....

Description E-value Query
Range
Subject
Range
gi|21593152 - gi|21593152|gb|AAM65101.1| flavanone 3-hydroxylase FH3 [Arabidopsis thaliana]
303.0 [0..1] [350..9]

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Predicted Domain #1
Region A:
Residues: [1-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE  60
   61 NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY FWGTPALNRS GDALKRGAQA 120
  121 SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF 180
  181 EAIAQTLNLE LSGNRRSEYL SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE 240
  241 DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC 300
  301 YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.0
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
1-aminocyclopropane-1-carboxylate oxidase activity 2.55319769490634 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 1.82471557626796 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 1.45256699472411 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.881222146308311 bayes_pls_golite062009
oxidoreductase activity 0.748070809709687 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle