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Protein Overview: CTL1_ARATH

General Information:
Name(s) found: CTL1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6850314|gb|AAF29391.1|AC009999_11 Contains similarity to a basic endochitinase from Arabidopis thaliana gb|AB023448, and contains a Chitinases class I PF|00182 domain. ESTs gb|AI995747, gb|AA728545, gb|Z26222, gb|Z25683, gb|T88386, gb|T14122, gb|T0424 [NCBI NR]
  • pir||C86193 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21280935|gb|AAM44973.1| putative class I chitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|17226331|gb|AAL37737.1|AF422179_1 chitinase-like protein 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|17226329|gb|AAL37736.1|AF422178_1 chitinase-like protein 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15221283|ref|NP_172076.1| POM1 (POM-POM1); chitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|14334488|gb|AAK59442.1| putative class I chitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|12083324|gb|AAG48821.1|AF332458_1 putative class I chitinase [Arabidopsis thaliana] [NCBI NR]
  • Chitinase-like protein 1 OS=Arabidopsis thaliana GN=CTL1 PE=1 SV=1 [Swiss-Prot]
  • (Q9MA41) T20M3.12 protein (Putative endochitinase protein) (Chitinase-like protein 1) (Putative class I chitinase) [athaliana3702.FASTAC.txt]
  • putative class I chitinase [Arabidopsis thaliana]gi|14334488|gb|AAK59442.1| putative class I chitinase [Arabidopsis thaliana]gi|21280935|gb|AAM44973.1| putative class I chitinase [Arabidopsis thaliana]gi|17226331|gb|AAL37737.1| chitinase-like protein 1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Chitinase-like protein 1 (CTL1) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ERH2, ELP1, CTL1, ELP, HOT2, POM1 | POM1 (POM-POM1); chitinase | chr1:1766832-1768116 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative class I chitinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • chitinase-like protein 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ELP (ECTOPIC DEPOSITION OF LIGNIN IN PITH); chitinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Contains similarity to a basic endochitinase from Arabidopis thaliana gb|AB023448, and contains a Chitinases class I PF|00182 domain. ESTs gb|AI995747, gb|AA728545, gb|Z26222, gb|Z25683, gb|T88386, gb|T14122, gb|T04241, gb|N38122 come from this gene. [Ar [nr-271106-contam.fasta]
  • | Symbols: POM1, ERH2, ELP1, CTL1, ELP, HOT2, ATCTL1 | Chitinase family protein | chr1:1766833-1768117 REVERSE LENGTH=321 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: root epidermal cell differentiation [IMP]
    response to heat [IMP]
    multidimensional cell growth [IMP]
    response to salt stress [IMP]
    lignin biosynthetic process [IGI]
    regulation of salicylic acid metabolic process [IMP]
    response to cytokinin stimulus [IMP]
    response to water deprivation [IMP]
    Molecular Function: chitinase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTIRSGSIV ILVLLAVSFL ALVANGEDKT IKVKKVRGNK VCTQGWECSW WSKYCCNQTI  60
   61 SDYFQVYQFE QLFSKRNTPI AHAVGFWDYQ SFITAAALFE PLGFGTTGGK LMGQKEMAAF 120
  121 LGHVASKTSC GYGVATGGPL AWGLCYNREM SPMQSYCDES WKFKYPCSPG AEYYGRGALP 180
  181 IYWNFNYGAA GEALKADLLN HPEYIEQNAT LAFQAAIWRW MTPIKRAQPS AHDIFVGNWK 240
  241 PTKNDTLSKR GPTFGSTMNV LYGEYTCGQG SIDPMNNIIS HYLYFLDLMG IGREDAGPND 300
  301 ELSCAEQKPF NPSTVPSSSS S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..321] PSI-BLAST 89.0 No description for 2dkvA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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