YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CTL1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTIRSGSIV ILVLLAVSFL ALVANGEDKT IKVKKVRGNK VCTQGWECSW WSKYCCNQTI  60
   61 SDYFQVYQFE QLFSKRNTPI AHAVGFWDYQ SFITAAALFE PLGFGTTGGK LMGQKEMAAF 120
  121 LGHVASKTSC GYGVATGGPL AWGLCYNREM SPMQSYCDES WKFKYPCSPG AEYYGRGALP 180
  181 IYWNFNYGAA GEALKADLLN HPEYIEQNAT LAFQAAIWRW MTPIKRAQPS AHDIFVGNWK 240
  241 PTKNDTLSKR GPTFGSTMNV LYGEYTCGQG SIDPMNNIIS HYLYFLDLMG IGREDAGPND 300
  301 ELSCAEQKPF NPSTVPSSSS S

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	321	0.99