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Protein Overview: RH37_ARATH

General Information:
Name(s) found: RH37_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 633 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASWADVAD SENTGSGSSN QNSHPSRPAY VPPHLRNRPA ASEPVAPLPA NDRVGYGGPP  60
   61 SGSRWAPGGS GVGVGGGGGY RADAGRPGSG SGYGGRGGGG WNNRSGGWDR REREVNPFEN 120
  121 DDSEPEPAFT EQDNTVINFD AYEDIPIETS GDNVPPPVNT FAEIDLGEAL NLNIRRCKYV 180
  181 KPTPVQRHAI PILLEGRDLM ACAQTGSGKT AAFCFPIISG IMKDQHVQRP RGSRTVYPLA 240
  241 VILSPTRELA SQIHDEAKKF SYQTGVKVVV AYGGTPINQQ LRELERGVDI LVATPGRLND 300
  301 LLERARVSMQ MIRFLALDEA DRMLDMGFEP QIRKIVEQMD MPPRGVRQTL LFSATFPREI 360
  361 QRLAADFLAN YIFLAVGRVG SSTDLIVQRV EFVLDSDKRS HLMDLLHAQR ENGIQGKQAL 420
  421 TLVFVETKRG ADSLENWLCI NGFPATSIHG DRTQQEREVA LKAFKSGRTP ILVATDVAAR 480
  481 GLDIPHVAHV VNFDLPNDID DYVHRIGRTG RAGKSGLATA FFNDGNTSLA RPLAELMQEA 540
  541 NQEVPEWLTR YASRSSFGGG KNRRSGGRFG GRDFRREGSF GSGRGGYGGG GGGYGGGGGY 600
  601 GGGGGYGGGG GYGGGYGGAS SGGYGGEPPS AWD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] deduced N/A No confident structure predictions are available.
    2 View Details [159..558] PSI-BLAST 100.0 No description for 2i4iA was found.
    3 View Details [559..633] FFAS03 1.45 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle