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Protein Overview: ASD1_ARATH

General Information:
Name(s) found: ASD1_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thaliana GN=ASD1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 678 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IDA]
    plant-type cell wall [IDA]
    vacuole [IDA]
    Biological Process: xylan catabolic process [IDA]
    Molecular Function: xylan 1,4-beta-xylosidase activity [IDA]
    alpha-N-arabinofuranosidase activity [IDA]
    hydrolase activity, acting on glycosyl bonds [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMESWKLLR SVCVLSFLLG SCFVYQSLRV VDAQEDPKPA VTLQVDASNG GGRPIPETLF  60
   61 GIFFEEINHA GAGGLWAELV SNRGFEAGGQ NTPSNIWPWS IVGDHSSIYV ATDRSSCFER 120
  121 NKIALRMDVL CDSKGCPSGG VGVYNPGYWG MNIEEGKKYK VALYVRSTGD IDLSVSLTSS 180
  181 NGSRTLASEK IIASASDVSK WIKKEVLLEA KATDPSARLQ LTTTKKGSIW IDQVSAMPVD 240
  241 THKGHGFRND LFQMMADIKP RFIRFPGGCF VEGEWLSNAF RWKETVGPWE ERPGHFGDVW 300
  301 KYWTDDGLGH FEFFQMAEDI GAAPIWVFNN GISHNDEVET ASIMPFVQEA LDGIEFARGD 360
  361 ANSTWGSVRA KMGRQEPFEL KYVAIGNEDC GKTYYRGNYI VFYDAIKKAY PDIKIISNCD 420
  421 GSSHPLDHPA DYYDYHIYTS ASNLFSMYHQ FDRTSRKGPK AFVSEYAVTG KDAGTGSLLA 480
  481 SLAEAAFLIG LEKNSDIVEM ASYAPLFVNT NDRRWNPDAI VFNSSHLYGT PSYWVQRFFA 540
  541 ESSGATLLTS TLKGNSTSLV ASAISWKNNG KDYIRIKAVN FGANSENMQV LVTGLDPNVM 600
  601 RVSGSKKTVL TSTNVMDENS FSQPEKVVPH ESLLELAEED MTVVLPPHSF SSFDLLKESA 660
  661 KIRMPISDSS SHQKTTTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] deduced N/A No confident structure predictions are available.
    2 View Details [86..197] PSI-BLAST 21.0 Carbohydrate binding module from a thermostable xylanase
    3 View Details [198..678] PSI-BLAST 125.0 Crystal structure of a family 51 (GH51) alpha-L-arabinofuranosidase from Geobacillus stearothermophilus T6

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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