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Protein Overview: gi|4388826, gi|1...

General Information:
Name(s) found: gi|4388826 [NCBI NR]
gi|25411543 [NCBI NR]
gi|15225569 [NCBI NR]
Description(s) found:
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  • gi|4388826|gb|AAD19781.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F84513 hypothetical protein At2g14060 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15225569|ref|NP_179022.1| S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZPT3) At2g14060 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|25411543|pir||F84513 hypothetical protein At2g14060 [imported] - Arabidopsis thalianagi|15225569|ref|NP_179022.1| S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 S-adenosyl-L-methionine:carboxyl methyltransferase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | chr2:5921596-5922849 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:5914514-5915767 REVERSE LENGTH=359 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At2g14060 OS=Arabidopsis thaliana GN=At2g14060 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 359 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: fatty acid biosynthetic process [TAS]
    Molecular Function: S-adenosylmethionine-dependent methyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGTGDHSY ATNSHYQRSV FYEIQPLVIE NVREMLLKNG FPGCIKVADL GCSTGQNTVL  60
   61 AMSAIAYTIM ESYQQMSKNP PEIDCYLNDL PENDFNTTFK LFHSFQEKLK PEVKGKWFVS 120
  121 GVPGSFYSRL FPRKSLHFVH SAFSIHWLSR IPDGLESNTK SIHIKYPYPS NVYKSYLNQF 180
  181 KIDFSLFLKM RSEEVVHNGH MVLTFVGRKV SDTLSKDCFQ VWSLLSDCLL DLASEGFVND 240
  241 SMVKSFNMPF YNPNEEEVRE FILKEGSFEI TKIEKFDHVV PYKIDREEED EEQSLQLEAG 300
  301 IKHASWARCI TEPLLVAHFG DAIIEPVFNK YAHYMAKYLS VSNHRRNMTL VIVVSLTRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..359] PSI-BLAST 132.0 CRYSTAL STRUCTURE OF SALICYLIC ACID CARBOXYL METHYLTRANSFERASE (SAMT)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle