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Protein Overview: gi|6522585, gi|1...

General Information:
Name(s) found: gi|6522585 [NCBI NR]
gi|15232711 [NCBI NR]
gi|11264181 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|6522585|emb|CAB61950.1| beta-D-glucan exohydrolase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232711|ref|NP_190288.1| glycosyl hydrolase family 3 protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T45640 beta-D-glucan exohydrolase-like protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 636 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: carbohydrate metabolic process [IEA][ISS]
    Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGSNETCVY KNKDAPVEAR VKDLLSRMTL PEKIGQMTQI ERVVTTPPVI TDNFIGSVLN  60
   61 GGGSWPFEDA KTSDWADMID GYQNAALASR LGIPIIYGID AVHGNNNVYG ATIFPHNIGL 120
  121 GATSLVMLLH IDLEPKSLGR NKVVVKCDRD ADLIRRVGAA TALEVRACGA HWAFAPCVAA 180
  181 LRDPRWGRSY ESYSEDPDII CELSSLVSGL QGEPPKEHPN GYPFLAGRNN VVACAKHFVG 240
  241 DGGTDKGINE GNTIVSYEEL EKIHLAPYLN CLAQGVSTVM ASYSSWNGSK LHSDYFLLTE 300
  301 LLKQKLGFKG FVISDWEALE RLSEPFGSNY RNCVKISVNA GVDMVMVPFK YEQFIKDLTD 360
  361 LVESGEVTMS RIDDAVERIL RVKFVAGLFE HPLTDRSLLG TVGCKEHREL ARESVRKSLV 420
  421 LLKNGTNSEK PFLPLDRNVK RILVTGTHAD DLGYQCGGWT KAWFGLSGRI TIGTTLLDAI 480
  481 KEAVGDKTEV IYEKTPSEET LASLQRFSYA IVAVGETPYA ETLGDNSELT IPLNGNDIVT 540
  541 ALAEKIPTLV VLFSGRPLVL EPLVLEKAEA LVAAWLPGTE GQGMTDVIFG DYDFEGKLPV 600
  601 SWFKRVDQLP LTADANSYDP LFPLGFGLNY NSSENV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..636] PSI-BLAST 155.0 Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on glycosyl bonds
    		•  3.1190602686215 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  2.98773241907716 bayes_pls_golite062009
  • catalytic activity
    		•  2.22613067995402 bayes_pls_golite062009
  • hydrolase activity
    		•  1.22060946899705 bayes_pls_golite062009
  • chitinase activity
    		•  0.67854733864231 bayes_pls_golite062009
  • glucosidase activity
    		•  0.58717079348538 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.16438321606077 bayes_pls_golite062009
  • amylase activity
    		•  0.0914002140078796 bayes_pls_golite062009
  • alpha-amylase activity
    		•  0.0521244165288097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle