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Protein Overview: MYB12_ARATH

General Information:
Name(s) found: MYB12_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75317981|sp|O22264.1|MYB12_ARATH RecName: Full=Transcription factor MYB12; AltName: Full=Myb-related protein 12; Short=AtMYB12 [NCBI NR]
  • pir||T00438 probable MYB family transcription factor [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|41619214|gb|AAS10050.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|2529681|gb|AAC62864.1| myb family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|22655478|gb|AAM98331.1| At2g47460/T30B22.24 [Arabidopsis thaliana] [NCBI NR]
  • gi|16974621|gb|AAL31213.1| At2g47460/T30B22.24 [Arabidopsis thaliana] [NCBI NR]
  • gi|15226609|ref|NP_182268.1| MYB12 (MYB DOMAIN PROTEIN 12); DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1 [Swiss-Prot]
  • (O22264) Putative MYB family transcription factor (At2g47460/T30B22.24) [athaliana3702.FASTAC.txt]
  • At2g47460/T30B22.24 [Arabidopsis thaliana]gi|2529681|gb|AAC62864.1| myb family transcription factor [Arabidopsis thaliana]gi|16974621|gb|AAL31213.1| At2g47460/T30B22.24 [Arabidopsis thaliana]gi|7446166|pir||T00438 probable MYB family transcription fact [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MYB12 belongs to subgroup 7 of the R2R3-MYB family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MYB12, ATMYB12 | ATMYB12/MYB12 (MYB DOMAIN PROTEIN 12); DNA binding / transcription activator/ transcription factor | chr2:19483508-19486312 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • myb family transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g47460/T30B22.24 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB12; DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MYB12, ATMYB12, PFG1 | myb domain protein 12 | chr2:19476438-19479242 FORWARD LENGTH=371 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 371 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    flavonoid biosynthetic process [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY  60
   61 LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKLHNFI 120
  121 RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN 180
  181 ADVAGADKEA LMVESSGAEA ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE 240
  241 SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN 300
  301 DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD 360
  361 DESALVAWLL S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 36.0 c-Myb, DNA-binding domain
    2 View Details [150..371] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle