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Protein Overview: GATA4_ARATH

General Information:
Name(s) found: GATA4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7288001|emb|CAB81839.1| GATA transcription factor 4 [Arabidopsis thaliana] [NCBI NR]
  • gi|62900345|sp|O49743.1|GATA4_ARATH RecName: Full=GATA transcription factor 4; Short=AtGATA-4 [NCBI NR]
  • gi|2959736|emb|CAA74002.1| homologous to GATA-binding transcription factors [Arabidopsis thaliana] [NCBI NR]
  • gi|15232355|ref|NP_191612.1| zinc finger (GATA type) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15215891|gb|AAK91489.1| AT3g60530/T8B10_190 [Arabidopsis thaliana] [NCBI NR]
  • gi|14517395|gb|AAK62588.1| AT3g60530/T8B10_190 [Arabidopsis thaliana] [NCBI NR]
  • gi|14190407|gb|AAK55684.1|AF378881_1 AT3g60530/T8B10_190 [Arabidopsis thaliana] [NCBI NR]
  • pir||T47864 GATA transcription factor 4 - Arabidopsis thaliana [NCBI NR]
  • GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1 [Swiss-Prot]
  • (O49743) Homologous to GATA-binding transcription factors (GATA transcription factor 4) (AT3G60530/T8B10_190) [athaliana3702.FASTAC.txt]
  • homologous to GATA-binding transcription factors [Arabidopsis thaliana]gi|7288001|emb|CAB81839.1| GATA transcription factor 4 [Arabidopsis thaliana]gi|15215891|gb|AAK91489.1| AT3g60530/T8B10_190 [Arabidopsis thaliana]gi|14517395|gb|AAK62588.1| AT3g6053 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 GATA transcription factor 4 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | zinc finger (GATA type) family protein | chr3:22384323-22385122 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • GATA transcription factor 4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • homologous to GATA-binding transcription factors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g60530/T8B10_190 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GATA transcription factor 4 (AtGATA-4) [nr-271106-contam.fasta]
  • transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GATA4 | GATA transcription factor 4 | chr3:22373348-22374147 FORWARD LENGTH=240 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: response to light stimulus [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVYGMSSPD LLRIDDLLDF SNDEIFSSSS TVTSSAASSA ASSENPFSFP SSTYTSPTLL  60
   61 TDFTHDLCVP SDDAAHLEWL SRFVDDSFSD FPANPLTMTV RPEISFTGKP RSRRSRAPAP 120
  121 SVAGTWAPMS ESELCHSVAK PKPKKVYNAE SVTADGARRC THCASEKTPQ WRTGPLGPKT 180
  181 LCNACGVRYK SGRLVPEYRP ASSPTFVLTQ HSNSHRKVME LRRQKEQQES CVRIPPFQPQ 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] MSA 3.289996 View MSA. No confident structure predictions are available.
    2 View Details [152..240] PSI-BLAST 16.154902 Erythroid transcription factor GATA-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.270879137859077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle