Protein: | GATA4_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 240 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GATA4_ARATH.
Description | E-value | Query Range |
Subject Range |
|
141.0 | [0..1] | [238..1] |
Region A: Residues: [1-151] |
1 11 21 31 41 51 | | | | | | 1 MDVYGMSSPD LLRIDDLLDF SNDEIFSSSS TVTSSAASSA ASSENPFSFP SSTYTSPTLL 60 61 TDFTHDLCVP SDDAAHLEWL SRFVDDSFSD FPANPLTMTV RPEISFTGKP RSRRSRAPAP 120 121 SVAGTWAPMS ESELCHSVAK PKPKKVYNAE S |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [152-240] |
1 11 21 31 41 51 | | | | | | 1 VTADGARRCT HCASEKTPQW RTGPLGPKTL CNACGVRYKS GRLVPEYRPA SSPTFVLTQH 60 61 SNSHRKVMEL RRQKEQQESC VRIPPFQPQ |
Detection Method: | |
Confidence: | 16.154902 |
Match: | 2gatA |
Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.270879137859077 | bayes_pls_golite062009 |