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Protein Overview: gi|15218901, gi|...

General Information:
Name(s) found: gi|5080806 [NCBI NR]
gi|25296016 [NCBI NR]
gi|15218901 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|5080806|gb|AAD39315.1|AC007258_4 Putative heat shock protein [Arabidopsis thaliana] [NCBI NR]
  • pir||A96621 probable heat shock protein F23H11.4 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218901|ref|NP_176181.1| DNAJ heat shock protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 331 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD  60
   61 PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG FRYYPRDAED IFAEFFGASE 120
  121 KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV 180
  181 PDGLGKSKPV EEILKIDITP GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD 240
  241 GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK 300
  301 RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 24.0 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [141..331] PSI-BLAST 36.0 No description for 2q2gA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • unfolded protein binding
    		•  5.16965422989143 bayes_pls_golite062009
  • heat shock protein binding
    		•  2.17994194200939 bayes_pls_golite062009
  • binding
    		•  2.03854863870179 bayes_pls_golite062009
  • protein binding
    		•  1.63230390088325 bayes_pls_golite062009
  • chaperone binding
    		•  1.61155546076854 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2131700498174 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.01835792943261 bayes_pls_golite062009
  • DNA binding
    		•  0.72916846057707 bayes_pls_golite062009
  • Hsp70 protein binding
    		•  0.541755903922701 bayes_pls_golite062009
  • transferase activity
    		•  0.240656521918556 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0276971914937192 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle