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Protein Overview: FK164_ARATH

General Information:
Name(s) found: FK164_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 230 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast thylakoid lumen [IDA][ISS]
    thylakoid [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: protein folding [IEA]
    Molecular Function: peptidyl-prolyl cis-trans isomerase activity [ISS]
    FK506 binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILTMKLVHP LHHSLSSSIP FPSRKRQSKP YRCSLPSPGC EKVIRTETVL PPAPVSCEGR  60
   61 RVLLGCLLAT ASGILSTGSA EAVSTSRRAL RASKLPESDF TTLPNGLKYY DIKVGNGAEA 120
  121 VKGSRVAVHY VAKWKGITFM TSRQGLGVGG GTPYGFDVGQ SERGNVLKGL DLGVEGMRVG 180
  181 GQRLVIVPPE LAYGKKGVQE IPPNATIELD IELLSIKQSP FGTPVKIVEG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] PSI-BLAST 52.39794 Macrophage infectivity potentiator protein (MIP)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidyl-prolyl cis-trans isomerase activity
    		•  4.0615867467963 bayes_pls_golite062009
  • cis-trans isomerase activity
    		•  3.99265212272703 bayes_pls_golite062009
  • isomerase activity
    		•  2.31710030777753 bayes_pls_golite062009
  • macrolide binding
    		•  1.45588410598423 bayes_pls_golite062009
  • FK506 binding
    		•  1.16004031104259 bayes_pls_golite062009
  • catalytic activity
    		•  0.885282592863018 bayes_pls_golite062009
  • binding
    		•  0.137502262416976 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle