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Protein Overview: gi|89111898, gi|...

General Information:
Name(s) found: gi|89111898 [NCBI NR]
gi|6730651 [NCBI NR]
gi|18409190 [NCBI NR]
Description(s) found:
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  • gi|89111898|gb|ABD60721.1| At1g69080 [Arabidopsis thaliana] [NCBI NR]
  • gi|6730651|gb|AAF27072.1|AC008262_21 F4N2.5 [Arabidopsis thaliana] [NCBI NR]
  • gi|18409190|ref|NP_564951.1| universal stress protein (USP) family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LQB2) F4N2.5 [athaliana3702.FASTAC.txt]
  • F4N2.5 [Arabidopsis thaliana]gi|18409190|ref|NP_564951.1| universal stress protein (USP) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Universal stress protein (USP) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | universal stress protein (USP) family protein | chr1:25975795-25976906 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g69080 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • F4N2.5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Adenine nucleotide alpha hydrolases-like superfamily protein | chr1:25972132-25973243 REVERSE LENGTH=223 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Adenine nucleotide alpha hydrolases-like protein OS=Arabidopsis thaliana GN=At1g69080 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 223 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to stress [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKGEGFFV SRLRANVRVQ PPTTTSQHGC SHEPPTTSIE IKGRRIIVVV DSCSEAKNAL  60
   61 LWTLSHCAQP QDSILLLHFL KAKTSQSGDL ANKEEGEDES CDKPTTSRAD KKVSALKTMC 120
  121 ELKRPEVKTE VVFVKGDEKG PTIVKEARER EASLLVLGQK KQHATWRLLM VWASQARPVT 180
  181 KHDFVEYCIN NSPCMAIAVR KRGKKLGGYT LTTKRHKDFW LLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] PSI-BLAST 21.69897 "Hypothetical" protein MJ0577

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.298809327772818 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle