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Protein Overview: gi|7485548, gi|3...

General Information:
Name(s) found: gi|7485548 [NCBI NR]
gi|3341678 [NCBI NR]
gi|15224911 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • pir||T01585 probable RING zinc finger protein homolog At2g44580 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3341678|gb|AAC27460.1| putative RING zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15224911|ref|NP_181986.1| protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 624 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [ISS]
    protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEIGGAEAV INLKSGYSLP ISYHPCFGPH EDLLLLEADD KLVSDIFHQR YDFEAFGVTL  60
   61 RGLPDEDAVL CTKSKTYAIK FVGNSNSMFL IPPSIFPGDA QVSDTNNNVS VLKIAPGNME 120
  121 LVEASPRLDK LKQILLANPF GAGEVEAMMD VDNDDLDHSG KKDLALYTWS DLVNTVQASD 180
  181 EELRNGLQSL SAIEIDGFWR VIDENYLDVI LRMLLHNCVL KDWSFDDLDE DEVVNALVAD 240
  241 EFPSQLASHC LRVFGSKVNE TDKWKLEPRL VCLHFARQIL REEKMRLESF MEEWKKKIPD 300
  301 GMEERFEMLE GEVLTEKIGI ETRVYTFSVR SLPSTPEERF SVLFKHRSKW EWKDLEPYLR 360
  361 FACFLASRSW RRYRTFTVQH RRRWRKTAAE EKHSSPYCTI CLEDAAEGEK MRRITACSHC 420
  421 FHVDCIDPWL MKKSTCPLCR AEIPPVPPGN PLVALFVPPG VIEMFTKGII PDALLIFSRM 480
  481 FVETVIQLSQ FIAESVIIVS VAVFTLRLFY RFACFLASRS WRRYRTFTVH HRRRWRKTTA 540
  541 EEKHSSPYCT ICLENATEGE KMRRIAACSH CFHVDCIDPW LEKKSMCPLC RAEIPPVPPG 600
  601 NPLRALFIPP GVIEMFTKGI DSDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] PSI-BLAST 6.09691 Crystal Structure Analysis of ClpB
    2 View Details [241..386] MSA 4.601989 View MSA. No confident structure predictions are available.
    3 View Details [387..459] PSI-BLAST 12.0 EL5 RING-H2 domain
    4 View Details [460..624] FFAS03 2.65 Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
    		•  0.0159092335062434 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle