| Protein: | gi|7485548, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 624 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7485548, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
200.0 | [0..2] | [386..21] |
|
Region A: Residues: [1-240] |
1 11 21 31 41 51
| | | | | |
1 MEEIGGAEAV INLKSGYSLP ISYHPCFGPH EDLLLLEADD KLVSDIFHQR YDFEAFGVTL 60
61 RGLPDEDAVL CTKSKTYAIK FVGNSNSMFL IPPSIFPGDA QVSDTNNNVS VLKIAPGNME 120
121 LVEASPRLDK LKQILLANPF GAGEVEAMMD VDNDDLDHSG KKDLALYTWS DLVNTVQASD 180
181 EELRNGLQSL SAIEIDGFWR VIDENYLDVI LRMLLHNCVL KDWSFDDLDE DEVVNALVAD 240
241
|
| Detection Method: |  |
| Confidence: | 6.09691 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
|
Region A: Residues: [241-386] |
1 11 21 31 41 51
| | | | | |
1 EFPSQLASHC LRVFGSKVNE TDKWKLEPRL VCLHFARQIL REEKMRLESF MEEWKKKIPD 60
61 GMEERFEMLE GEVLTEKIGI ETRVYTFSVR SLPSTPEERF SVLFKHRSKW EWKDLEPYLR 120
121 FACFLASRSW RRYRTFTVQH RRRWRK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [387-459] |
1 11 21 31 41 51
| | | | | |
1 TAAEEKHSSP YCTICLEDAA EGEKMRRITA CSHCFHVDCI DPWLMKKSTC PLCRAEIPPV 60
61 PPGNPLVALF VPP
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [460-624] |
1 11 21 31 41 51
| | | | | |
1 GVIEMFTKGI IPDALLIFSR MFVETVIQLS QFIAESVIIV SVAVFTLRLF YRFACFLASR 60
61 SWRRYRTFTV HHRRRWRKTT AEEKHSSPYC TICLENATEG EKMRRIAACS HCFHVDCIDP 120
121 WLEKKSMCPL CRAEIPPVPP GNPLRALFIP PGVIEMFTKG IDSDA
|
| Detection Method: | |
| Confidence: | 2.65 |
| Match: | 1v87A |
| Description: | Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0159092335062434 | bayes_pls_golite062009 |
