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Protein Overview: DNJ10_ARATH

General Information:
Name(s) found: DNJ10_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 398 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKETEYYDV LGVSPTATES EIKKAYYIKA RQVHPDKNPN DPQAAHNFQV LGEAYQVLSD  60
   61 SGQRQAYDAC GKSGISTDAI IDPAAIFAML FGSELFEGYI GQLAMASMAS LDIFTEGDQF 120
  121 DTKKIQEKLR IVQKEREDKL AQILKDRLNE YVINKDEFIS NAEAEVARLS NAAYGVDMLN 180
  181 TIGYIYVRQA AKELGKKAIY LGVPFIAEWF RNKGHFIKSQ LTAATGAYAL FQLQEEMKRQ 240
  241 LNTEGNYTEE ELEEYLQAHK RVMIDSLWKL NVADIEATLC RVCQLVLQDP EAKREELRTR 300
  301 ARGLKALGRI FQRAKTASES DPLENSEPQK LNGNGKNHDE DTSTSPKSSE ASHSTSGPQE 360
  361 PQSPYVEEFK LGDEQFNYYF PRPAPPPGAG KYSSSGYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 26.69897 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [115..242] PSI-BLAST 4.39794 Solution structure of zinc finger domain from human DnaJ subfamily A menber 3
    3 View Details [243..398] MSA 2.429989 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • unfolded protein binding
    		•  3.04403163860617 bayes_pls_golite062009
  • heat shock protein binding
    		•  2.17994194200939 bayes_pls_golite062009
  • binding
    		•  2.03854863870179 bayes_pls_golite062009
  • chaperone binding
    		•  1.61155546076854 bayes_pls_golite062009
  • protein binding
    		•  0.912937133925792 bayes_pls_golite062009
  • Hsp70 protein binding
    		•  0.541755903922701 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.423488346839872 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.146399219759372 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
  • DNA binding
    		•  0.10307408349439 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle