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Protein Overview: gi|7435381, gi|3...

General Information:
Name(s) found: gi|7435381 [NCBI NR]
gi|7268778 [NCBI NR]
gi|3250691 [NCBI NR]
gi|15235201 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T04763 chitinase homolog T16H5.180 - Arabidopsis thaliana [NCBI NR]
  • gi|7268778|emb|CAB78984.1| putative chitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|3250691|emb|CAA19699.1| putative chitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15235201|ref|NP_193717.1| glycosyl hydrolase family 18 protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 366 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: chitinase activity [IEA]
    catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTKLISIT FFLSLLLRFS SAQTVVKATY WFAESESPLA QIDSSLFTHL FCAFADINTL  60
   61 TYQVIVSSRN KPKFSTFTQT VRRRNPTVKT LLSIGGDFTY NFAFASMASN PTSRKLFISS 120
  121 SIKLARSCGF HGLDLNWKYP SITTEMDNFG KLLREWRLAV EAEARSSGKP RLLLTAAVFY 180
  181 SYSYYSVLHP VNAVADSLDW VNLVAYDFYE SGSSRVTCSP APLYDPITTG PSGDAGVRAW 240
  241 TQAGLPAKKA VLGFPLYGYA WCLTDAKNHN YYANSSGPAI SPDGSIGYDQ IRRFIVDNKA 300
  301 TMVYNSNLVQ NYCYAKKTWI GYDDNQSIVM KVKYAKQRGL LGYFSWHIGA DDNSRLSRAG 360
  361 SVLFQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..366] PSI-BLAST 100.0 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • imaginal disc growth factor activity
    		•  3.9608908661313 bayes_pls_golite062009
  • growth factor activity
    		•  2.18932950777991 bayes_pls_golite062009
  • chitinase activity
    		•  1.96922204880842 bayes_pls_golite062009
  • receptor binding
    		•  1.89435893935497 bayes_pls_golite062009
  • binding
    		•  1.1885466730171 bayes_pls_golite062009
  • protein binding
    		•  0.690517649847952 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle