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Protein Overview: EDE1_ARATH

General Information:
Name(s) found: EDE1_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana GN=EDE1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: nuclear microtubule [IDA]
    Biological Process: cell division [IMP]
    seed development [IMP]
    microtubule cytoskeleton organization [IMP]
    endosperm development [IMP]
    cellularization of endosperm [IMP]
    Molecular Function: microtubule binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEARIGRSME HPSTPAINAP APVPPPSTRR PRVREVSSRF MSPISSSSSS SSSSSAGDLH  60
   61 QLTSNSPRHH HQHQNQRSTS AQRMRRQLKM QEGDENRPSE TARSLDSPFP LQQVDGGKNP 120
  121 KQHIRSKPLK ENGHRLDTPT TAMLPPPSRS RLNQQRLLTA SAATRLLRSS GISLSSSTDG 180
  181 EEDNNNREIF KSNGPDLLPT IRTQAKAFNT PTASPLSRSL SSDDASMFRD VRASLSLKNG 240
  241 VGLSLPPVAP NSKIQADTKK QKKALGQQAD VHSLKLLHNR YLQWRFANAN AEVKTQSQKA 300
  301 QAERMFYSLG LKMSELSDSV QRKRIELQHL QRVKAVTEIV ESQTPSLEQW AVLEDEFSTS 360
  361 LLETTEALLN ASLRLPLDSK IKVETKELAE ALVVASKSME GIVQNIGNLV PKTQEMETLM 420
  421 SELARVSGIE KASVEDCRVA LLKTHSSQME ECYLRSQLIQ HQKKCHQQEC TTSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] MSA 8.174997 View MSA. No confident structure predictions are available.
    2 View Details [260..474] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle