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Protein Overview: RH32_ARATH

General Information:
Name(s) found: RH32_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9758271|dbj|BAB08770.1| RNA helicase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|75333773|sp|Q9FFT9.1|RH32_ARATH RecName: Full=Probable DEAD-box ATP-dependent RNA helicase 32 [NCBI NR]
  • gi|15240418|ref|NP_200302.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana] [NCBI NR]
  • DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana GN=RH32 PE=2 SV=1 [Swiss-Prot]
  • (Q9FFT9) RNA helicase-like protein [athaliana3702.FASTAC.txt]
  • RNA helicase-like protein [Arabidopsis thaliana]gi|15240418|ref|NP_200302.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DEAD/DEAH box helicase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DEAD/DEAH box helicase, putative | chr5:22315894-22318945 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • RNA helicase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Probable DEAD-box ATP-dependent RNA helicase 32 [nr-271106-contam.fasta]
  • ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | DEA(D/H)-box RNA helicase family protein | chr5:22298668-22301719 REVERSE LENGTH=739 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 739 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKIKKTKGM RKQIRLNEVE EINLLKQWIE SQKPDSGFNP LSLRPLPKDS KIGKSEDGKN  60
   61 GTVFSRYAGV RKFAQLPISD KTKRGLKDAK YVDMTDVQSA AIPHALCGRD ILGAARTGSG 120
  121 KTLAFVIPIL EKLHRERWSP EDGVGCIIIS PTRELAAQTF GVLNKVGKFH KFSAGLLIGG 180
  181 REGVDVEKER VHEMNILVCA PGRLLQHMDE TPNFECPQLQ ILILDEADRV LDSAFKGQLD 240
  241 PIISQLPKHR QTLLFSATQT KKVKDLARLS LRDPEYISVH AEAVTATPTS LMQTVMIVPV 300
  301 EKKLDMLWSF IKTHLNSRIL VFLSTKKQVK FVHEAFNKLR PGIPLKSLHG KMSQEKRMGV 360
  361 YSQFIERQSV LFCTDVLARG LDFDKAVDWV VQVDCPEDVA SYIHRVGRTA RFYTQGKSLL 420
  421 FLTPSEEKMI EKLQEAKVPI KLIKANNQKL QEVSRLLAAL LVKYPDLQGV AQRAFITYLR 480
  481 SIHKRRDKEI FDVSKLSIEN FSASLGLPMT PRIRFTNLKT KKKGVYESSI AMEIENAQEY 540
  541 EAPLVVKKDL LGEDLEEEDF ALKPRKEGKV VEKSTKEEEV LIPGNRVLKN KKLKINLHRP 600
  601 FGSRVVLDEE GNSLAPLASV AAEAGTEVAL DEERMNDYYK KVGAEMRKAD IEDKKVDKER 660
  661 RREKRMKQKI KRKRGAMEDE EEEEEEDHDG SGSSDDETGR NSKRAKKIVS DNEENGGKIN 720
  721 TDSLSVADLE EMALKFITQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] deduced N/A No confident structure predictions are available.
    2 View Details [71..287] PSI-BLAST 49.69897 No description for 2pl3A was found.
    3 View Details [288..444] PSI-BLAST 27.221849 No description for 2hjvA was found.
    4 View Details [445..495] deduced N/A No confident structure predictions are available.
    5 View Details [496..739] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle