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Protein Overview: gi|9294166, gi|4...

General Information:
Name(s) found: gi|9294166 [NCBI NR]
gi|40641826 [NCBI NR]
gi|15230255 [NCBI NR]
Description(s) found:
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  • gi|9294166|dbj|BAB02068.1| CDC45 (cell division cycle 45) -like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|40641826|emb|CAD43725.1| putative cell division cyle protein 45 [Arabidopsis thaliana] [NCBI NR]
  • gi|15230255|ref|NP_189146.1| CDC45 (cell division cycle 45) [Arabidopsis thaliana] [NCBI NR]
  • (Q9LSG6) CDC45 (Cell division cycle 45)-like protein [athaliana3702.FASTAC.txt]
  • putative cell division cyle protein 45 [Arabidopsis thaliana]gi|9294166|dbj|BAB02068.1| CDC45 (cell division cycle 45) -like protein [Arabidopsis thaliana]gi|15230255|ref|NP_189146.1| cell division control protein-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Cell division control protein-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CDC45 | CDC45 (CELL DIVISION CYCLE 45) | chr3:9144299-9146089 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative cell division cyle protein 45 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • CDC45 (cell division cycle 45) -like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • CDC45 (CELL DIVISION CYCLE 45) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CDC45 | cell division cycle 45 | chr3:9144292-9146082 FORWARD LENGTH=596 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • CDC45 (Cell division cycle 45)-like protein OS=Arabidopsis thaliana GN=CDC45 PE=2 SV=1 [ARATH-contam.fasta]
  • Cell division control protein 45 OS=Arabidopsis thaliana GN=cdc45 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 596 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: gametophyte development [IMP]
    premeiotic DNA synthesis [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRIKKVESF YAKLRESATS LSSQNPLLIF PSTSDVDSLC ALKVITHILE SDSIQYSCFP  60
   61 VSSFLEIHKY AGPAGLCSTS LESPPVTILL INWGCHRDLK LVLKLGPSAR VFVVDSHRPI 120
  121 HLHNLSDYNE QVVVLHTDDD ERQGDLAYDF DVLKLANESF QLRVEDAGEE SDEEEEDEEE 180
  181 DEEDDDDDDG DRPSKRRKMG DGVKVFKKLK RDYYKMGTFH GKPSGCLLFE LSHMLRKNTN 240
  241 ELLWLACVSL TDQFVHERLT DERYQAAVME LEQHINSSGN IDKITSVTLK DGTKVRAPDC 300
  301 SRISYEEEPR LMLLREWTLF DSMLCSSYIA TKLKTWSDNG IKKLKLLLAR MGFALIECQQ 360
  361 KFPYMSLEVK RKMKQEFDRF LPEYGLNDFY YRSFLRLHGY SSRVSAADVV YGITALLESF 420
  421 LGSGGSSASK QFGEAYDALS LNNLDKLRSG MQQAIKVQRA ILRQGSAAIT KSGCIRSGRK 480
  481 FRWVKIEDSM DAKYLGYPQA LTKFCYFLMD ALREKGARMK PMLCACASQQ PGKILVVGVC 540
  541 GKPRLGAVRG NAFGNAFRKA AQESRADYFH ELFESSWIVL DASAVNSFMI RLTEKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] MSA 1.029978 View MSA. No confident structure predictions are available.
    2 View Details [216..299] MSA 1.033986 View MSA. Confident ab initio structure predictions are available.
    3 View Details [300..405] MSA 1.034977 View MSA. Confident ab initio structure predictions are available.
    4 View Details [406..596] MSA 1.034937 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle