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Protein Overview: gi|15218895, gi|...

General Information:
Name(s) found: gi|9280655 [NCBI NR]
gi|7485919 [NCBI NR]
gi|15218895 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|9280655|gb|AAF86524.1|AC002560_17 F21B7.32 [Arabidopsis thaliana] [NCBI NR]
  • pir||T00889 hypothetical protein F21B7.3 - Arabidopsis thaliana [NCBI NR]
  • gi|15218895|ref|NP_171868.1| cathepsin-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: proteolysis [IEA]
    Molecular Function: cysteine-type peptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLDFFSFVG NGEKRAIHWW QTYKAPKVPN EIKREAATAK KKGPTITPVT QTDDNGVRSK  60
   61 LCYLNCNSYK IEICWAIALT RLLQVIYNIT QEYIAGRLRF DHDDLVVHLK MKKTRGKRPG 120
  121 SMKLKNLKDA INHIAVKGLL KKRESKSKAG SDIGHHTKWN FSMEKCPSKD FIKSKVDISP 180
  181 VAIAFDITHN FQFIGNVSKK SNGLSIYNVS GVDMEDGDAG GHVVLIVGYG YTKENKLFFL 240
  241 IQNSWGEDWG VKGFGRIFID DESKTTLVYP DGPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..274] PSI-BLAST 61.221849 (Pro)cathepsin L

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.529663942126259 bayes_pls_golite062009
  • hydrolase activity
    		•  0.16837900182603 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle