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Protein Overview: gi|15235835, gi|...

General Information:
Name(s) found: gi|7267380 [NCBI NR]
gi|45773846 [NCBI NR]
gi|44021875 [NCBI NR]
gi|4325358 [NCBI NR]
gi|25296207 [NCBI NR]
gi|15235835 [NCBI NR]
Description(s) found:
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  • gi|7267380|emb|CAB77941.1| putative pathogenesis-related protein [Arabidopsis thaliana] [NCBI NR]
  • gi|45773846|gb|AAS76727.1| At4g07820 [Arabidopsis thaliana] [NCBI NR]
  • gi|44021875|gb|AAS46627.1| At4g07820 [Arabidopsis thaliana] [NCBI NR]
  • gi|4325358|gb|AAD17355.1| contains similarity to pathogenesis-related protein 1 precursors and SCP-like extracellular proteins (Pfam: PF00188, Score=79.8, E=4.1e-21, N=1) [Arabidopsis thaliana] [NCBI NR]
  • pir||D85077 probable pathogenesis-related protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15235835|ref|NP_192524.1| pathogenesis-related protein, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZPG2) F5K24.6 protein (Putative pathogenesis-related protein) [athaliana3702.FASTAC.txt]
  • putative pathogenesis-related protein [Arabidopsis thaliana]gi|4325358|gb|AAD17355.1| contains similarity to pathogenesis-related protein 1 precursors and SCP-like extracellular proteins (Pfam: PF00188, Score=79.8, E=4.1e-21, N=1) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pathogenesis-related protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | pathogenesis-related protein, putative | chr4:4636861-4637343 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g07820 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative pathogenesis-related protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • contains similarity to pathogenesis-related protein 1 precursors and SCP-like extracellular proteins (Pfam: PF00188, Score=79.8, E=4.1e-21, N=1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr4:4636864-4637346 REVERSE LENGTH=160 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At4g07820 OS=Arabidopsis thaliana GN=F5K24.6 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    extracellular region [IEA][ISS]
    Biological Process: NONE FOUND
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNSYPNLLV LAIALALSFS VPLKAQDQPQ DYFNAHNRAR VSVGVSPLMW SQTLTAYAQA  60
   61 YAEKRRDCGL FLSGGPYGET IKADIIDFSA EEFVSTFLNQ KSDYDYTTNT CRAGKSCDGY 120
  121 KQVLFRKSVF LGCAKVKCNN GGFLAICSYD PSVILSERPF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 34.69897 P14A, NMR, 20 STRUCTURES


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle