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Protein Overview: gi|22135769, gi|...

General Information:
Name(s) found: gi|8777492 [NCBI NR]
gi|22135769 [NCBI NR]
gi|15810047 [NCBI NR]
gi|15232485 [NCBI NR]
Description(s) found:
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  • gi|8777492|dbj|BAA97072.1| oxidoreductase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22135769|gb|AAM91041.1| AT3g15090/K15M2_24 [Arabidopsis thaliana] [NCBI NR]
  • gi|15810047|gb|AAL06950.1| AT3g15090/K15M2_24 [Arabidopsis thaliana] [NCBI NR]
  • gi|15232485|ref|NP_188127.1| oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LK96) Oxidoreductase-like protein (AT3g15090/K15M2_24) [athaliana3702.FASTAC.txt]
  • oxidoreductase-like protein [Arabidopsis thaliana]gi|22135769|gb|AAM91041.1| AT3g15090/K15M2_24 [Arabidopsis thaliana]gi|15810047|gb|AAL06950.1| AT3g15090/K15M2_24 [Arabidopsis thaliana]gi|15232485|ref|NP_188127.1| oxidoreductase, zinc-binding dehydrog [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oxidoreductase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr3:5076854-5078877 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • oxidoreductase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g15090/K15M2_24 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | GroES-like zinc-binding alcohol dehydrogenase family protein | chr3:5076847-5078870 FORWARD LENGTH=366 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT3g15090/K15M2_24 OS=Arabidopsis thaliana GN=At3g15090 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 366 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEA]
    Biological Process: metabolic process [IEA]
    oxidation reduction [IEA]
    Molecular Function: zinc ion binding [IEA][ISS]
    oxidoreductase activity [IEA]
    catalytic activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN  60
   61 EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS GEVAAIGTSV KSLKVGQEVF 120
  121 GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR 180
  181 LLVFGGGGAV GFSAIQLAVA SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK 240
  241 FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ 300
  301 YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG 360
  361 KVVLEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..366] PSI-BLAST 64.30103 Crystal structure of human Zeta-Crystallin with bound NADP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  4.14217990101505 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  2.27417613545298 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  2.0836009784049 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  1.68027744358887 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  1.22416351603098 bayes_pls_golite062009
  • chaperone binding
    		•  1.04678886151518 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.839863523675468 bayes_pls_golite062009
  • transporter activity
    		•  0.793769336118517 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.635891484075352 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.576163737662951 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.51503848775098 bayes_pls_golite062009
  • binding
    		•  0.405786564527334 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.300373102236296 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.239024094835991 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.204320937203153 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.165260811069909 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.0257250793986203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle