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Protein Overview: gi|21436029, gi|...

General Information:
Name(s) found: gi|21436029 [NCBI NR]
gi|20197314 [NCBI NR]
gi|20196967 [NCBI NR]
gi|18407407 [NCBI NR]
gi|16323214 [NCBI NR]
Description(s) found:
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  • gi|21436029|gb|AAM51592.1| At2g47630/F17A22.2 [Arabidopsis thaliana] [NCBI NR]
  • gi|20197314|gb|AAC63619.2| putative phospholipase [Arabidopsis thaliana] [NCBI NR]
  • gi|20196967|gb|AAM14848.1| putative phospholipase [Arabidopsis thaliana] [NCBI NR]
  • gi|18407407|ref|NP_566106.1| esterase/lipase/thioesterase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16323214|gb|AAL15341.1| At2g47630/F17A22.2 [Arabidopsis thaliana] [NCBI NR]
  • (O22248) Putative phospholipase (At2g47630/F17A22.2) [athaliana3702.FASTAC.txt]
  • At2g47630/F17A22.2 [Arabidopsis thaliana]gi|20197314|gb|AAC63619.2| putative phospholipase [Arabidopsis thaliana]gi|20196967|gb|AAM14848.1| putative phospholipase [Arabidopsis thaliana]gi|16323214|gb|AAL15341.1| At2g47630/F17A22.2 [Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Esterase/lipase/thioesterase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | esterase/lipase/thioesterase family protein | chr2:19541707-19543981 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g47630/F17A22.2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • catalytic/ hydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative phospholipase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | alpha/beta-Hydrolases superfamily protein | chr2:19534637-19536911 FORWARD LENGTH=351 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Alpha/beta-hydrolase domain-containing protein OS=Arabidopsis thaliana GN=At2g47630 PE=2 SV=2 [ARATH-contam.fasta]
  • Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana GN=At2g47630 PE=2 SV=2 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: catalytic activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSEFQYHE EYVRNSRGVE LFACRWIPSS SSSPKALVFL CHGYGMECSD SMKECGIRLA  60
   61 SAGYAVFGMD YEGHGRSMGS RCYIKKFANV VNDCYDYYTS ICAQEEYMDK GRFLYGESMG 120
  121 GAVTLLLHKK DPLFWNGAIL VAPMCKISEK VKPHPIVINL LTRVEEIIPK WKIVPTKDVI 180
  181 DAAFKDLVKR EEVRNNKLIY QDKPRLKTAL EMLRTSMNLE DTLHEITMPF FVLHGEADTV 240
  241 TDPEVSKALY EKASTRDKTL KLYPGMWHAL TSGEPDCNVD LVFADIINWL DLRTADPASL 300
  301 TVTPIRVGNT TSVQRVTTVN GVSNGHRRPK RPFFNLLCGL NRGRLVPRST V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..351] PSI-BLAST 41.0 CHLOROPEROXIDASE F/PROPIONATE COMPLEX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity
    		•  0.716449555827534 bayes_pls_golite062009
  • lipase activity
    		•  0.602417432627875 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.535924720022784 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.307380251731525 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  0.054530214464529 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.00303228391703936 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle