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Protein Overview: NLP4_ARATH

General Information:
Name(s) found: NLP4_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Protein NLP4 OS=Arabidopsis thaliana GN=NLP4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 844 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nodulation [ISS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSFLQSEN VVMDADFMDG LLLDGCWLET TDGSEFLNIA PSTSSVSPFD PTSFMWSPTQ  60
   61 DTSALCTSGV VSQMYGQDCV ERSSLDEFQW NKRWWIGPGG GGSSVTERLV QAVEHIKDYT 120
  121 TARGSLIQLW VPVNRGGKRV LTTKEQPFSH DPLCQRLANY REISVNYHFS AEQDDSKALA 180
  181 GLPGRVFLGK LPEWTPDVRF FKSEEYPRVH HAQDCDVRGT LAIPVFEQGS KICLGVIEVV 240
  241 MTTEMVKLRP ELESICRALQ AVDLRSTELP IPPSLKGCDL SYKAALPEIR NLLRCACETH 300
  301 KLPLAQTWVS CQQQNKSGCR HNDENYIHCV STIDDACYVG DPTVREFHEA CSEHHLLKGQ 360
  361 GVAGQAFLTN GPCFSSDVSN YKKSEYPLSH HANMYGLHGA VAIRLRCIHT GSADFVLEFF 420
  421 LPKDCDDLEE QRKMLNALST IMAHVPRSLR TVTDKELEEE SEVIEREEIV TPKIENASEL 480
  481 HGNSPWNASL EEIQRSNNTS NPQNLGLVFD GGDKPNDGFG LKRGFDYTMD SNVNESSTFS 540
  541 SGGFSMMAEK KRTKADKTIT LDVLRQYFAG SLKDAAKNIG VCPTTLKRIC RQHGIQRWPS 600
  601 RKIKKVGHSL QKIQRVIDSV QGVSGPLPIG SFYANFPNLV SQSQEPSQQA KTTPPPPPPV 660
  661 QLAKSPVSSY SHSSNSSQCC SSETQLNSGA TTDPPSTDVG GALKKTSSEI ELQSSSLDET 720
  721 ILTLSSLENI PQGTNLLSSQ DDDFLRIKVS YGEEKIRLRM RNSRRLRDLL WEIGKRFSIE 780
  781 DMSRYDLKYL DEDNEWVLLT CDEDVEECVD VCRTTPSHTI KLLLQASSHH FPERSSATEY 840
  841 SLWH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A No confident structure predictions are available.
    2 View Details [93..269] MSA 3.051968 View MSA. No confident structure predictions are available.
    3 View Details [270..453] MSA 6.115994 View MSA. No confident structure predictions are available.
    4 View Details [454..526] deduced N/A No confident structure predictions are available.
    5 View Details [527..655] Pfam 26.309804 No description for PF02042.7 was found. No confident structure predictions are available.
    6 View Details [656..742] deduced N/A No confident structure predictions are available.
    7 View Details [743..844] PSI-BLAST 23.69897 Solution Structure of the PB1 domain of PKCiota


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle