| Protein: | NLP4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 844 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NLP4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
654.0 | [0..2] | [841..19] |
|
|
642.0 | [0..11] | [837..8] |
|
|
617.0 | [0..6] | [828..16] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MEDSFLQSEN VVMDADFMDG LLLDGCWLET TDGSEFLNIA PSTSSVSPFD PTSFMWSPTQ 60
61 DTSALCTSGV VSQMYGQDCV ERSSLDEFQW NK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [93-269] |
1 11 21 31 41 51
| | | | | |
1 RWWIGPGGGG SSVTERLVQA VEHIKDYTTA RGSLIQLWVP VNRGGKRVLT TKEQPFSHDP 60
61 LCQRLANYRE ISVNYHFSAE QDDSKALAGL PGRVFLGKLP EWTPDVRFFK SEEYPRVHHA 120
121 QDCDVRGTLA IPVFEQGSKI CLGVIEVVMT TEMVKLRPEL ESICRALQAV DLRSTEL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [270-453] |
1 11 21 31 41 51
| | | | | |
1 PIPPSLKGCD LSYKAALPEI RNLLRCACET HKLPLAQTWV SCQQQNKSGC RHNDENYIHC 60
61 VSTIDDACYV GDPTVREFHE ACSEHHLLKG QGVAGQAFLT NGPCFSSDVS NYKKSEYPLS 120
121 HHANMYGLHG AVAIRLRCIH TGSADFVLEF FLPKDCDDLE EQRKMLNALS TIMAHVPRSL 180
181 RTVT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [454-526] |
1 11 21 31 41 51
| | | | | |
1 DKELEEESEV IEREEIVTPK IENASELHGN SPWNASLEEI QRSNNTSNPQ NLGLVFDGGD 60
61 KPNDGFGLKR GFD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [527-655] |
1 11 21 31 41 51
| | | | | |
1 YTMDSNVNES STFSSGGFSM MAEKKRTKAD KTITLDVLRQ YFAGSLKDAA KNIGVCPTTL 60
61 KRICRQHGIQ RWPSRKIKKV GHSLQKIQRV IDSVQGVSGP LPIGSFYANF PNLVSQSQEP 120
121 SQQAKTTPP
|
| Detection Method: | |
| Confidence: | 26.309804 |
| Match: | PF02042.7 |
| Description: | No description for PF02042.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [656-742] |
1 11 21 31 41 51
| | | | | |
1 PPPPVQLAKS PVSSYSHSSN SSQCCSSETQ LNSGATTDPP STDVGGALKK TSSEIELQSS 60
61 SLDETILTLS SLENIPQGTN LLSSQDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [743-844] |
1 11 21 31 41 51
| | | | | |
1 DFLRIKVSYG EEKIRLRMRN SRRLRDLLWE IGKRFSIEDM SRYDLKYLDE DNEWVLLTCD 60
61 EDVEECVDVC RTTPSHTIKL LLQASSHHFP ERSSATEYSL WH
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 1vd2A |
| Description: | Solution Structure of the PB1 domain of PKCiota |
Matching Structure (courtesy of the PDB): |
|
