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Protein Overview: NLP1_ARATH

General Information:
Name(s) found: NLP1_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Protein NLP1 OS=Arabidopsis thaliana GN=NLP1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 909 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDDGGSDGG EGNGGFSPNS SFGAFADTAM DLDFMDELLF DGCWLETTDS KSLKQTEQSP  60
   61 SASTAMNDNS PFLCFGENPS QDNFSNEETE RMFPQAEKFL LEEAEVGKSW WIAPSASEGP 120
  121 SSSVKERLLQ AISGLNEAVQ DKDFLVQIWV PIQQEGKSFL TTWAQPHLFN QEYSSLAEYR 180
  181 HVSETYNFPA DEGMKDFVGL PGRVFLQKFP EWTPDVRFFR RDEYPRIKEA QKCDVRGSLA 240
  241 LPVFERGSGT CLGVVEIVTT TQKMNYRQEL EKMCKALEAV DLRSSSNLNT PSSEFLQVYS 300
  301 DFYCAALPEI KDFLATICRS YDFPLALSWA PCARQGKVGS RHSDENFSEC VSTIDSACSV 360
  361 PDEQSKSFWE ACSEHHLLQG EGIVGKAFEA TKLFFVPEVA TFSKTNYPLA HHAKISGLHA 420
  421 ALAVPLKSKS GLVEFVLEFF FPKACLDTEA QQEMLKSLCV TLQQDFRSSN LFIKDLELEV 480
  481 VLPVRETMLF SENLLCGAET VESLTEIQMQ ESSWIAHMIK ANEKGKDVSL SWEYQKEDPK 540
  541 ELSSGRENSQ LDPVPNNVPL EAEQLQQAST PGLRVDIGPS TESASTGGGN MLSSRRPGEK 600
  601 KRAKTEKTIG LEVLRQYFAG SLKDAAKSIG VCPTTLKRIC RQHGIMRWPS RKIKKVGHSL 660
  661 KKLQLVMDSV QGAQGSIQLD SFYTSFPELN SPNMSSNGPS LKSNEQPSHL NAQTDNGIMA 720
  721 EENPRSPSSS CSKSSGSSNN NENTGNILVA EDADAVLKRA HSEAQLHNVN QEETKCLART 780
  781 QSHKTFKEPL VLDNSSPLTG SSNTSLRARG AIKVKATFGE ARIRFTLLPS WGFAELKQEI 840
  841 ARRFNIDDIS WFDLKYLDDD KEWVLLTCEA DLVECIDIYR LTQTHTIKIS LNEASQVKLS 900
  901 GSFGNTGLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] deduced N/A No confident structure predictions are available.
    2 View Details [95..321] MSA 5.101996 View MSA. No confident structure predictions are available.
    3 View Details [322..520] MSA 3.173989 View MSA. No confident structure predictions are available.
    4 View Details [521..588] deduced N/A No confident structure predictions are available.
    5 View Details [589..706] Pfam 27.920819 No description for PF02042.7 was found. No confident structure predictions are available.
    6 View Details [707..771] deduced N/A No confident structure predictions are available.
    7 View Details [772..909] PSI-BLAST 22.30103 Solution Structure of the PB1 domain of PKCiota


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle