| Protein: | NLP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 909 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NLP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
753.0 | [0..16] | [909..16] |
|
|
594.0 | [0..26] | [905..1] |
|
|
594.0 | [0..12] | [899..2] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MEDDGGSDGG EGNGGFSPNS SFGAFADTAM DLDFMDELLF DGCWLETTDS KSLKQTEQSP 60
61 SASTAMNDNS PFLCFGENPS QDNFSNEETE RMFP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-321] |
1 11 21 31 41 51
| | | | | |
1 QAEKFLLEEA EVGKSWWIAP SASEGPSSSV KERLLQAISG LNEAVQDKDF LVQIWVPIQQ 60
61 EGKSFLTTWA QPHLFNQEYS SLAEYRHVSE TYNFPADEGM KDFVGLPGRV FLQKFPEWTP 120
121 DVRFFRRDEY PRIKEAQKCD VRGSLALPVF ERGSGTCLGV VEIVTTTQKM NYRQELEKMC 180
181 KALEAVDLRS SSNLNTPSSE FLQVYSDFYC AALPEIKDFL ATICRSY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [322-520] |
1 11 21 31 41 51
| | | | | |
1 DFPLALSWAP CARQGKVGSR HSDENFSECV STIDSACSVP DEQSKSFWEA CSEHHLLQGE 60
61 GIVGKAFEAT KLFFVPEVAT FSKTNYPLAH HAKISGLHAA LAVPLKSKSG LVEFVLEFFF 120
121 PKACLDTEAQ QEMLKSLCVT LQQDFRSSNL FIKDLELEVV LPVRETMLFS ENLLCGAETV 180
181 ESLTEIQMQE SSWIAHMIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [521-588] |
1 11 21 31 41 51
| | | | | |
1 ANEKGKDVSL SWEYQKEDPK ELSSGRENSQ LDPVPNNVPL EAEQLQQAST PGLRVDIGPS 60
61 TESASTGG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [589-706] |
1 11 21 31 41 51
| | | | | |
1 GNMLSSRRPG EKKRAKTEKT IGLEVLRQYF AGSLKDAAKS IGVCPTTLKR ICRQHGIMRW 60
61 PSRKIKKVGH SLKKLQLVMD SVQGAQGSIQ LDSFYTSFPE LNSPNMSSNG PSLKSNEQ
|
| Detection Method: | |
| Confidence: | 27.920819 |
| Match: | PF02042.7 |
| Description: | No description for PF02042.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [707-771] |
1 11 21 31 41 51
| | | | | |
1 PSHLNAQTDN GIMAEENPRS PSSSCSKSSG SSNNNENTGN ILVAEDADAV LKRAHSEAQL 60
61 HNVNQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [772-909] |
1 11 21 31 41 51
| | | | | |
1 EETKCLARTQ SHKTFKEPLV LDNSSPLTGS SNTSLRARGA IKVKATFGEA RIRFTLLPSW 60
61 GFAELKQEIA RRFNIDDISW FDLKYLDDDK EWVLLTCEAD LVECIDIYRL TQTHTIKISL 120
121 NEASQVKLSG SFGNTGLS
|
| Detection Method: | |
| Confidence: | 22.30103 |
| Match: | 1vd2A |
| Description: | Solution Structure of the PB1 domain of PKCiota |
Matching Structure (courtesy of the PDB): |
|
