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Protein Overview: PLA18_ARATH

General Information:
Name(s) found: PLA18_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8844130|gb|AAF80222.1|AC025290_11 Contains similarity to petal abundant lipase-like protein Pn47p mRNA from Ipomoea nil gb|U55867 and contains a lipase PF|01764 domain. [Arabidopsis thaliana] [NCBI NR]
  • pir||C86198 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221426|ref|NP_172115.1| lipase class 3 family protein [Arabidopsis thaliana] [NCBI NR]
  • Phospholipase A1-IIalpha OS=Arabidopsis thaliana GN=At1g06250 PE=2 SV=1 [Swiss-Prot]
  • (Q9LNC2) F9P14.11 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [imported] - Arabidopsis thalianagi|15221426|ref|NP_172115.1| lipase class 3 family protein [Arabidopsis thaliana]gi|8844130|gb|AAF80222.1| Contains similarity to petal abundant lipase-like protein Pn47p mRNA from Ipomoea nil gb|U55 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Lipase class 3 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | lipase class 3 family protein | chr1:1913338-1914849 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Contains similarity to petal abundant lipase-like protein Pn47p mRNA from Ipomoea nil gb|U55867 and contains a lipase PF|01764 domain. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • triacylglycerol lipase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:1913339-1914850 REVERSE LENGTH=423 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: lipid metabolic process [IEA][ISS]
    Molecular Function: triglyceride lipase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEGIPKRWK VLSGQNKWKG LLDPLDPDLR RYIIHYGEMS QVGYDAFNWD RKSRYAGDCY  60
   61 YSKNRLLART GFLKANPFRY KVTKYIYATA SIKLPISFIV KSLSKDASRV QTNWMGYIAV 120
  121 ATDQGKAMLG RRDIVVAWRG TLQPYEWAND FDFPLEPAIS VFPVTDPKDN PRIGSGWLDI 180
  181 YTASDSRSPY DTTSAQEQVQ GELKRLLELY KDEEISITFT GHSLGAVMSV LSAADLVYGK 240
  241 KNNININLQK KQVPITVFAF GSPRIGDHNF KNVVDSLQPL NILRIVNVPD VAPHYPLLLY 300
  301 SEIGEVLEIN TLNSTYLKRS LNFRNYHNLE IYLHGMAGMQ DTDGVFKLEI GRDISLVNKG 360
  361 LDALKDEYLV PSTWRCLANK GMLQMDDGTW KLDVHRRDHD DDVDADDNDD SSTSNQLQEL 420
  421 NTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] MSA 3.241993 View MSA. No confident structure predictions are available.
    2 View Details [80..423] PSI-BLAST 37.69897 Triacylglycerol lipase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle