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View Structure Prediction Details

Protein: PLA18_ARATH
Organism: Arabidopsis thaliana
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLA18_ARATH.

Description E-value Query
Range
Subject
Range
gi|21537306 - gi|21537306|gb|AAM61647.1| lipase-like protein [Arabidopsis thaliana]
383.0 [0..1] [423..1]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEGIPKRWK VLSGQNKWKG LLDPLDPDLR RYIIHYGEMS QVGYDAFNWD RKSRYAGDCY  60
   61 YSKNRLLART GFLKANPFR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YKVTKYIYAT ASIKLPISFI VKSLSKDASR VQTNWMGYIA VATDQGKAML GRRDIVVAWR  60
   61 GTLQPYEWAN DFDFPLEPAI SVFPVTDPKD NPRIGSGWLD IYTASDSRSP YDTTSAQEQV 120
  121 QGELKRLLEL YKDEEISITF TGHSLGAVMS VLSAADLVYG KKNNININLQ KKQVPITVFA 180
  181 FGSPRIGDHN FKNVVDSLQP LNILRIVNVP DVAPHYPLLL YSEIGEVLEI NTLNSTYLKR 240
  241 SLNFRNYHNL EIYLHGMAGM QDTDGVFKLE IGRDISLVNK GLDALKDEYL VPSTWRCLAN 300
  301 KGMLQMDDGT WKLDVHRRDH DDDVDADDND DSSTSNQLQE LNTD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 1dt3A
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle