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Protein Overview: SCR_ARATH

General Information:
Name(s) found: SCR_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 653 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: asymmetric cell division [IMP]
    gravitropism [IMP]
    radial pattern formation [IMP]
    maintenance of protein location in nucleus [IMP]
    Molecular Function: transcription factor activity [ISS]
    protein binding [IPI]
    [NOT]protein homodimerization activity [IPI]
    sequence-specific DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESGDFNGG QPPPHSPLRT TSSGSSSSNN RGPPPPPPPP LVMVRKRLAS EMSSNPDYNN  60
   61 SSRPPRRVSH LLDSNYNTVT PQQPPSLTAA ATVSSQPNPP LSVCGFSGLP VFPSDRGGRN 120
  121 VMMSVQPMDQ DSSSSSASPT VWVDAIIRDL IHSSTSVSIP QLIQNVRDII FPCNPNLGAL 180
  181 LEYRLRSLML LDPSSSSDPS PQTFEPLYQI SNNPSPPQQQ QQHQQQQQQH KPPPPPIQQQ 240
  241 ERENSSTDAP PQPETVTATV PAVQTNTAEA LRERKEEIKR QKQDEEGLHL LTLLLQCAEA 300
  301 VSADNLEEAN KLLLEISQLS TPYGTSAQRV AAYFSEAMSA RLLNSCLGIY AALPSRWMPQ 360
  361 THSLKMVSAF QVFNGISPLV KFSHFTANQA IQEAFEKEDS VHIIDLDIMQ GLQWPGLFHI 420
  421 LASRPGGPPH VRLTGLGTSM EALQATGKRL SDFADKLGLP FEFCPLAEKV GNLDTERLNV 480
  481 RKREAVAVHW LQHSLYDVTG SDAHTLWLLQ RLAPKVVTVV EQDLSHAGSF LGRFVEAIHY 540
  541 YSALFDSLGA SYGEESEERH VVEQQLLSKE IRNVLAVGGP SRSGEVKFES WREKMQQCGF 600
  601 KGISLAGNAA TQATLLLGMF PSDGYTLVDD NGTLKLGWKD LSLLTASAWT PRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] MSA 13.274997 View MSA. No confident structure predictions are available.
    2 View Details [194..304] deduced N/A No confident structure predictions are available.
    3 View Details [305..653] FFAS03 0.962 Hypothetical protein HI0319 (YecO)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle