YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|16648901, gi|...

General Information:
Name(s) found: gi|9759496 [NCBI NR]
gi|5823315 [NCBI NR]
gi|20148367 [NCBI NR]
gi|16648901 [NCBI NR]
gi|15239578 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|9759496|dbj|BAB10746.1| Myb-related transcription factor-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5823315|gb|AAD53096.1|AF175991_1 putative transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|20148367|gb|AAM10074.1| Myb-related transcription factor-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16648901|gb|AAL24302.1| Myb-related transcription factor-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15239578|ref|NP_200234.1| MYB49 (myb domain protein 49); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • (Q9SPG6) Putative transcription factor (Myb-related transcription factor-like protein) [athaliana3702.FASTAC.txt]
  • Myb-related transcription factor-like protein [Arabidopsis thaliana]gi|20148367|gb|AAM10074.1| Myb-related transcription factor-like protein [Arabidopsis thaliana]gi|16648901|gb|AAL24302.1| Myb-related transcription factor-like protein [Arabidopsis thal [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor (MYB49) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtMYB49, MYB49 | MYB49 (myb domain protein 49); transcription factor | chr5:22033583-22035071 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Myb-related transcription factor-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB49; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MYB49, AtMYB49 | myb domain protein 49 | chr5:22016357-22017845 REVERSE LENGTH=319 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Myb domain protein 49 OS=Arabidopsis thaliana GN=MYB49 PE=2 SV=1 [ARATH-contam.fasta]
  • Myb-related transcription factor-like protein OS=Arabidopsis thaliana GN=MYB49 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 319 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    response to salicylic acid stimulus [IEP]
    regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKSSSSEES EVKKGPWTPE EDEKLVGYIQ THGPGKWRTL PKNAGLKRCG KSCRLRWTNY  60
   61 LRPDIKRGEF SLQEEETIIQ LHRLLGNKWS AIAIHLPGRT DNEIKNYWNT HIKKKLLRMG 120
  121 IDPVTHCPRI NLLQLSSFLT SSLFKSMSQP MNTPFDLTTS NINPDILNHL TASLNNVQTE 180
  181 SYQPNQQLQN DLNTDQTTFT GLLNSTPPVQ WQNNGEYLGD YHSYTGTGDP SNNKVPQAGN 240
  241 YSSAAFVSDH INDGENFKAG WNFSSSMLAG TSSSSSTPLN SSSTFYVNGG SEDDRESFGS 300
  301 DMLMFHHHHD HNNNALNLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 40.0 c-Myb, DNA-binding domain
    2 View Details [119..319] MSA 2.606995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle